Pairwise Alignments

Query, 272 a.a., Hydroxymethylpyrimidine ABC transporter, ATPase component from Variovorax sp. SCN45

Subject, 282 a.a., ABC transporter, ATP-binding protein from Pseudomonas putida KT2440

 Score =  186 bits (473), Expect = 4e-52
 Identities = 101/226 (44%), Positives = 139/226 (61%), Gaps = 7/226 (3%)

Query: 36  GVLALKDIDCSIEQGSFVTIVGPSGCGKSTLLRILAGLLDYGIGRVVLDGQPIQGTR--- 92
           G  AL  +  +IE+G FV+++GPSGCGKSTLL++ AGL     G V   G+   GT    
Sbjct: 38  GTHALSRVKLAIERGEFVSLLGPSGCGKSTLLKMFAGLEQPSAGHVRWWGKDAPGTDHHA 97

Query: 93  ----RDVGVVFQSSILLPWRTILENVMLPAEVLGIPAKQARERAMQLLHMVRLDGFEHKL 148
               R + +VFQ + L+PW  + +NV LP ++ G P  Q++ +    L +V L  F    
Sbjct: 98  GTPGRSLAMVFQEATLMPWAKVHDNVRLPLDLAGAPKAQSQLKVQAALELVGLGKFGDVY 157

Query: 149 PRQLSGGMQQRASIARALLHDPKILLMDEPFGALDAMTRERMNLELQRIWMESGKTVVLI 208
           PR+LSGGMQ RASIARAL  +P +LLMDEPFGALD  TR +++ +L+++W++   TVV +
Sbjct: 158 PRELSGGMQMRASIARALATEPNLLLMDEPFGALDEFTRNKLDSDLRQLWLKRDLTVVFV 217

Query: 209 THSIPEAVFLGDRVFVMSPRPGTLERVLPIDLPRPRSMDVMSHPTF 254
           THSI EAV+L  RV VM  RPG +   + ID P  R     + P F
Sbjct: 218 THSIFEAVYLSSRVIVMGARPGRVIADVIIDGPLERDEAYRTSPAF 263