Pairwise Alignments

Query, 338 a.a., Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) from Variovorax sp. SCN45

Subject, 342 a.a., putative amino-acid ABC transporter-binding protein YhdW from Pseudomonas putida KT2440

 Score =  358 bits (919), Expect = e-103
 Identities = 178/342 (52%), Positives = 240/342 (70%), Gaps = 4/342 (1%)

Query: 1   MKIVRIAAAMLLGICISGA---ATAGQTFDAVKKRGIVQCGVSTNLPGFAFTDSKGEWQG 57
           MK+++   A+L      GA   A AG T DAVKK+G VQCGVS  LPGF+  D++G+  G
Sbjct: 1   MKMLKTTLAVLTAAAALGAVSTAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVG 60

Query: 58  IDVDTCRAIAAAMFGNASKFKVVPLTTQARFTALQSGEVDVLTRNTTQTMSRDTTLGLIG 117
           ID D CRA+AAA+FG+A+K K   L  + RFTALQSGEVDVL+RNTT T SRD  +GL+ 
Sbjct: 61  IDADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVF 120

Query: 118 VGVNFYDSQGIMVTKDANVTSARKLAGATICVLPGTTTELNLTDWFRGLKIEFKPVLLDT 177
            GV +YD  G +V K   V+SA++L GATIC+  GTTTELN++D+FR   +++ P+  DT
Sbjct: 121 AGVTYYDGVGFLVNKKLGVSSAKELDGATICIQAGTTTELNVSDFFRANGLKYTPITFDT 180

Query: 178 VDEIKRAFVSGRCDGITMDKSQLALSRASFANAEKYLILPEALSKEPLGPMVRQGDEAWF 237
            DE  ++  SGRCD +T DKSQL   R+  A   +Y++LPE +SKEPLGP+VR+GDE WF
Sbjct: 181 SDESAKSLESGRCDVLTSDKSQLFAQRSKLAAPTEYVVLPETISKEPLGPVVRKGDEEWF 240

Query: 238 NVVRWTLNAMLEAEEYNLSSKNVDDVSKAAP-PHIQRILGLSPGLGKGLGLDDKWAYNII 296
           ++V+WTL AML AEE  ++SKNV+  +KA   P + R+LG     GK L L   W   I+
Sbjct: 241 SIVKWTLFAMLNAEEAGITSKNVEAEAKATKNPDVARLLGADGEYGKDLKLPKDWVVQIV 300

Query: 297 KQVGNYGEIFDRSLGASSPMKLERGLNALYTRGGLMYGWPIR 338
           KQVGNYGE+F+++LG S+ +K++RG+NAL+  GG+ Y  P+R
Sbjct: 301 KQVGNYGEVFEKNLGQSTDLKIDRGMNALWNNGGIQYAPPVR 342