Pairwise Alignments

Query, 369 a.a., L-amino acid ABC transporter (Glu/Asp/His/...), permease protein 2 AapM from Variovorax sp. SCN45

Subject, 319 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  122 bits (307), Expect = 1e-32
 Identities = 78/205 (38%), Positives = 113/205 (55%), Gaps = 7/205 (3%)

Query: 157 GLPLTLMLSVFGIAFAFPFGVCLALGRRSRMPAIKAICVGYIEFIRGVPLISLLFMSSVM 216
           GL  TL LSV         G+   L R S  P ++ +   Y+E +RG PL+  +F+    
Sbjct: 120 GLWTTLWLSVVSGILGLIIGLATGLCRLSSNPTLRDLSTIYVELVRGTPLLVQIFI---- 175

Query: 217 LPLFLPEGFSIDKLLRAQIAIIMFAAAYIAEIVRGGLQSIPKGQYEGADSIGLSYWQQMR 276
              F+    ++ +      A+ +F  AY+AEIVR G+QSI +GQ E A S+GLS  Q MR
Sbjct: 176 FYFFIGTVLNLSREFAGIAALSLFTGAYVAEIVRAGVQSITRGQNEAARSLGLSASQSMR 235

Query: 277 KVIVPQALKVVIPPLVSTFIALFKDTSLVVIIGIFDLTQSAKAALADPAWSGFGVEAYLF 336
            V++PQA K V+PPL   FI+L KDTSLV +I I +L +S +  +   ++S F  E    
Sbjct: 236 HVVLPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELLKSGREVIT-TSFSPF--EILFC 292

Query: 337 IGLIYFAFCYCISKYSSTLERSLAR 361
           +  +Y      +SK +S LER LA+
Sbjct: 293 VAGLYLLINLPLSKMASRLERRLAQ 317