Pairwise Alignments

Query, 927 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 905 a.a., Transcriptional regulator, LuxR family from Pseudomonas putida KT2440

 Score =  116 bits (290), Expect = 7e-30
 Identities = 229/939 (24%), Positives = 364/939 (38%), Gaps = 110/939 (11%)

Query: 23  RQGLLDRLAAPGARRCVVLRAPAGFGKSSLLLTWQRELVSADTDIAWVRLADVPEGDLHF 82
           R  L  RL A    R +++ APAGFGKSSL + +   L      + W+ L+        F
Sbjct: 34  RLRLCQRLEAGLGGRLLLVNAPAGFGKSSLAIEFCETLPEHWRSL-WLGLSQRDADPGRF 92

Query: 83  MTALMAALGGIDAAIPRQAVA----HARPDAYAIERLVIALVRGIAAQ---GRKVVLIVD 135
           +  L+  L     A+  QA+       R   +A E  +  L+  +A        ++L++D
Sbjct: 93  LERLLEGLQQYCPALGGQAMGLLKMRQRHQPFAFEEWLDGLLDELALYLQADTPLLLVLD 152

Query: 136 DVHCAQSENVLHALQLLVEYAPPNLLCVFASQDDLPMTLAHAPASKAVLELRNDDLRFSL 195
           D H AQ   +   LQ  + + PP L+ +  S+      LA    S+ ++EL   DLR + 
Sbjct: 153 DYHLAQGPVLDRCLQFFLNHLPPGLVLLVTSRQRPGWHLARLRLSRQLVELNEQDLRLTA 212

Query: 196 PESIDYLCMRLPDLDERAASAIHRLTEGWPALLR---LASADVRRRRGVQSSPLVHGVPD 252
            ES+  +  +   L  +A   + + ++GW A LR   LA++D    + +  +  +HG   
Sbjct: 213 DESLAVIGRQPTGLRGQALDNLIQRSDGWVAGLRFWQLAASDSADEQALPQA--LHG--G 268

Query: 253 PEPFAAYFHDHVFSRLSETQLRLLTCCAASTRFNAPLCADLAGAGFTPALCAELLEPLAR 312
                 Y  + V  RL       L   A   RF APLC  + G   + A+ + L      
Sbjct: 269 EGLIRDYLLEEVIDRLPADVQAFLDETACQERFCAPLCDAMRGRHDSAAVLSFL------ 322

Query: 313 EGLLSAVPEAHEP-PEPLDAPDAAPPRERWWYMHPLLRSVLLTRFAARPEAERLRVHATA 371
                   +AH+    PLD          W+  H L   +L +R A+     ++ +H  A
Sbjct: 323 --------QAHQVFLVPLD------EHGHWFRYHHLFSDLLRSRQASE---SQVALHLRA 365

Query: 372 CQSFAVRGMHHQAVRHALAAGNRETAARLAER-GASALFTQGRMTEMIALVRQLDTQTIG 430
           C+ F  + +  +AV  AL AG+ + AA L +      L  +  +  ++     L    + 
Sbjct: 366 CRWFEAQDLLDEAVEQALRAGHLDVAADLVQSLSEEQLLAEQNVGMLLRWKMDLPDSLLI 425

Query: 431 DNANLALWMAWVELADYRLDDCARSI----ELLRAQAGDIAPAMRYRLTLLGCLLAIRND 486
               L +  +W      +LD            L A +     +M  +   L  ++A    
Sbjct: 426 STPRLIVLYSWALGLACQLDAAEELAGYLSRFLPAPSATAQKSMLAQWLALSGVIARGRG 485

Query: 487 DNDALSRLLPELLAPPPGADDFALAGRRNVLTWLYLHRGEFEQARRIQRD--EPTPRVDG 544
           D +       E L   P           + L+ L +  G+F +AR   R+  E   RV G
Sbjct: 486 DRERTLAYCGEALQSLPSKRYGQRLVCLSTLSNLAIADGDFWRARGWNREALELAQRV-G 544

Query: 545 EPVVGTLFGSLVGRCLVGLSYAVEGQMHRAERIYRQVLSEAQERGAR--CAEAERLT--- 599
            P    LF +L       + +A  G++ RA    RQ L   Q   A+   A   RLT   
Sbjct: 545 NP----LFEALAHYDRARVLHA-RGEVLRALDEVRQGLQRLQGLSAQRLYAVRARLTLYE 599

Query: 600 AQLLVEVLYEQQGPLAAARFIQEQLGTHDGLIPDTALRMIIVSNRAQQAAGRWREALEHL 659
             LLV  L   QG       + E     D  I       +I +   ++  G + EA   L
Sbjct: 600 GYLLVSRLQPAQGRARLRAGLGEARACRD--ISVLIGHCVIATLDGRE--GHFAEAFAEL 655

Query: 660 AQAGSFLGRFGMDRA--LACVLLEQLRIQLASDDAEAARASLQEL-EVLHGRHPGVEPGT 716
           A+A   +  + +     LA + L +  + LA    + A + LQ L +   G  P   P  
Sbjct: 656 AEAERLMHIWDVPPVYYLAMITLVKCELWLAQGRTDLAESWLQRLGQTYGGEQPAAAP-- 713

Query: 717 LRRIADIVERARICMAMHDGDLLPTLAKIETLSHRYGQRGQVGFVAALQLQAAEVERRLG 776
                               +  P L     L      R Q+    A+Q  A  V+R  G
Sbjct: 714 --------------------EFHPLLPLHIALQQAALDRIQLRSDDAVQRLACLVKR--G 751

Query: 777 RAEASRARVCAAL-----------RLGHRLGLLSTLL-GAHDNALALIRTVATIPNLDPV 824
           +A        +AL           + G    LL +LL  AH   +  ++     P L+  
Sbjct: 752 QASGGMMLTVSALSQWLALLLDEGKEGQAAQLLPSLLEAAHGGVMQPMQ-----PLLEKH 806

Query: 825 LSFFIERIEALA--QLQSDARAEPPPVPRFRDDRRLSRLLTLREAEIAELLLQSLPNKKI 882
             +  E+++A A   +Q++     PPVP           L+ RE  + EL+ Q   N++I
Sbjct: 807 PQWLQEQLQAGAACPVQAELLKHLPPVPIASTGN--GEALSGREMAVLELIAQGCSNQQI 864

Query: 883 ALTLGLSLDTVKWHLKNIYMKLDAHGR-GAVAERMRLEL 920
           +  L +SL TVK H  +I  KL    R  AVA+   L L
Sbjct: 865 SERLFISLHTVKTHASHINSKLGVERRTQAVAKAKSLGL 903