Pairwise Alignments

Query, 927 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 911 a.a., HTH-type transcriptional regulator MalT from Pseudomonas sp. DMC3

 Score =  102 bits (253), Expect = 1e-25
 Identities = 209/927 (22%), Positives = 338/927 (36%), Gaps = 83/927 (8%)

Query: 21  LVRQGLLDRLAAPGARRCVVLRAPAGFGKSSLLLTWQRELVSADTDIAWVRLADVPEGDL 80
           ++R  L  RL A    R +++ APAGFGKSSL + + + L  A     W+ L+       
Sbjct: 32  VLRPRLCQRLQAGLGGRLLLVSAPAGFGKSSLAVEFCQSL-PAHWQSLWLGLSPRDSDPG 90

Query: 81  HFMTALMAALGGIDAAIPRQAVA----HARPDAYAIERLVIALVRGIAAQ---GRKVVLI 133
            F+  L+  L     A+   A+       R   +A E  +  L+  +A        ++L+
Sbjct: 91  RFLERLLEGLQDYFPALGAGALGLLKMRQRHQPFAFEEWLDGLLDELALHLDPAAPLLLV 150

Query: 134 VDDVHCAQSENVLHALQLLVEYAPPNLLCVFASQDDLPMTLAHAPASKAVLELRNDDLRF 193
           +DD H AQ   +   LQ  + + P  LL +  S+      LA    S+ +LEL   DLR 
Sbjct: 151 LDDYHLAQGPVLDRCLQFFLNHLPDGLLVMVTSRQRPDWHLARLRLSRQLLELHEQDLRL 210

Query: 194 SLPESIDYLCMRLPDLDERAASAIHRLTEGWPALLR---LASADVRRRRGVQSSPLVHGV 250
           +  E++  L      L   A  ++ + +EGW A LR   LA A+         + L   +
Sbjct: 211 THDEALTLLDRHSSSLRGEALESLIQRSEGWVAGLRFWLLAVAEAG-----NDAALPQAL 265

Query: 251 PDPEPFAA-YFHDHVFSRLSETQLRLLTCCAASTRFNAPLCADLAGAGFTPALCAELLEP 309
              E     Y  + V   L       L   A   RF    C++L  A       AE+L  
Sbjct: 266 NGGEGLIRDYLLEEVIDCLPAEVQSFLYETAPQERF----CSELCDAVREAHDSAEILRF 321

Query: 310 LAREGLLSAVPEAHEPPEPLDAPDAAPPRERWWYMHPLLRSVLLTRFAARPEAERLRVHA 369
           L    +            PLD          W+  H L   +L +R  A+       +H 
Sbjct: 322 LLAHQVFLV---------PLD------EHGHWYRYHHLFSDLLRSRPIAQAMVPNATLHL 366

Query: 370 TACQSFAVRGMHHQAVRHALAAGNRETAARLAER-GASALFTQGRMTEMIALVRQLDTQT 428
            AC+ F  +G+  +AV  AL AG+ + AA L +      L  +  +  ++     L    
Sbjct: 367 RACRWFNAQGLLDEAVEQALRAGHLDVAANLVQNLSEEQLLAEQNVGMLLRWKMDLPDSL 426

Query: 429 IGDNANLALWMAWVELADYRLDD----CARSIELLRAQAGDIAPAMRYRLTLLGCLLAIR 484
           +     L +  +W      +LD      +     L A +     +M  +   L  ++A  
Sbjct: 427 LISTPRLIVLYSWALGLACQLDAAEELASHLSRFLPAPSATAQKSMLAQWLALSGIIARG 486

Query: 485 NDDNDALSRLLPELLAPPPGADDFALAGRRNVLTWLYLHRGEFEQARRIQRD--EPTPRV 542
               +   R   E L   P           + L+ L +  G+  +AR + R+  E   RV
Sbjct: 487 RGHRELTLRYCSEALESLPAKRYGQRLMCLSTLSNLAIADGDLWRARGLNRESLELAQRV 546

Query: 543 DGEPVVGTLFGSLVGRCLVGLSYAVEGQMHRAERIYRQVLSEAQERGARCAEAERLTAQL 602
            G P+   L      R L        G++ RA     Q L        R    +RL A  
Sbjct: 547 -GNPLFEALAHYDRARVLQS-----RGEILRALDEVHQGLER-----LRGLSPQRLYAVR 595

Query: 603 LVEVLYE------QQGPLAAARFIQEQLGTHDGLIPDTALRMIIVSNRAQQAAGRWREAL 656
               LYE      +  P AA   +   +G        + L    V  R   A+G + +A 
Sbjct: 596 ARLTLYEGFLLAMRLQPQAARVRLLAGIGEARACRDISVLIGHCVIARLDGASGEFAKAF 655

Query: 657 EHLAQAGSFLGRFGMDRA--LACVLLEQLRIQLASDDAEAARASLQEL-EVLHGRHPGVE 713
             LA+A   +  + +     LA + L +  + LA    + A A L  L +   G +    
Sbjct: 656 AELAEAERLMHIWDVPPIYYLAMITLVKCELWLAQGRIDLAEAWLARLGQTYTGENAAAP 715

Query: 714 PGTLRRIADIVERARICMAMHDGDLLPTLAKIETLSHRYGQRGQVGFVAALQLQAAEVER 773
           P    ++   VE  +  + +  G  +    ++  L     Q G+         Q   +  
Sbjct: 716 PEFHPQLPLHVELQQALLDVIQGQPMLAEGRLNVLHENGQQTGRQLLSVMALTQKVALLL 775

Query: 774 RLGRAEASRARVCAALR--LGHRLGLLSTLLGAH-DNALALIRTVATIPNLDPVLSFFIE 830
             GR   +R  +  AL    G        LL +H D     ++ ++       +L+ F  
Sbjct: 776 SSGREPEARKVLSQALEAAAGGVFQPFDALLKSHADWMRGQLQALSCNAVSQQLLTHF-- 833

Query: 831 RIEALAQLQSDARAEPPPVPRFRDDRRLSRLLTLREAEIAELLLQSLPNKKIALTLGLSL 890
                          P   PR   +   +  L+ RE  +  L+ Q   N++I+  L +SL
Sbjct: 834 ---------------PTAAPRPTVESSATEQLSSRELAVLRLIAQGCSNQEISEQLFISL 878

Query: 891 DTVKWHLKNIYMKLDAHGRGAVAERMR 917
            TVK H  +I  KL    R     R +
Sbjct: 879 HTVKTHASHINSKLGVERRTQAVARAK 905