Pairwise Alignments

Query, 332 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 326 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score =  115 bits (289), Expect = 1e-30
 Identities = 92/298 (30%), Positives = 135/298 (45%), Gaps = 13/298 (4%)

Query: 41  FRRWIGASPSHRAAYNDVKRRWDAIEAPARELLRLKPDAATVNATRPRAVTPPLRR--RA 98
           F+RW+ A P+HRAAY+  +  W    APA  L   + DA  +         PP R   R 
Sbjct: 34  FKRWLLADPAHRAAYDQAQVLWQKSAAPAARLADEEQDA--LQRYLDAMARPPARGGWRR 91

Query: 99  FLGAAVSAAAVAGVAVAPTGFWRGPDEWGAD---DRTAVGEQRTVVASGDVDVTLNTRTS 155
             G A++A  V  V VA  G W  P  W  D   D ++ G+ R V+ +    VTL+  ++
Sbjct: 92  VAGLALAACLVLAVGVA--GGWH-PGYWLQDLQADYSSTGQIRQVILADQSQVTLDAGSA 148

Query: 156 VRRELVGGKMVGLDLIAGEAAVDLRGVRSAFTVLAGVGRSTAQAGSFEVRRWDGKVLVTC 215
           +  +   G+   + L+ G A  ++      F V A  G        FEVR       VT 
Sbjct: 149 IAVDFAQGER-RVRLLHGAAFFEVTHTGEPFLVEAAGGEVRVLGTQFEVREQGEGAQVTV 207

Query: 216 LEGAVRLEHPAGV--RQLQARQQTVYHATSVSGIAGIDPDVASAWRRGMLVFKQTRLADA 273
             G V +    G   R+L A QQ  Y A  V     +D D   AWR+G L + Q  LA  
Sbjct: 208 RSGRVGVSPAQGTVARELTANQQLTYRAGRVGDTLAVDSDNRLAWRQGWLNYYQVPLAQV 267

Query: 274 LEEINRYRSGRVVLLKDAARDKPVSGRFAIASLDLALWQLQEAFELRARSLPGGLLVL 331
           ++++ RY  GR++LL      + VSG F +A   LAL  L +      +++ G L ++
Sbjct: 268 IDDLGRYYPGRILLLDGDLGQRKVSGSFPVAEPLLALDSLGKVMGFSRQTVLGRLTLV 325