Pairwise Alignments

Query, 332 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 321 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score = 97.1 bits (240), Expect = 5e-25
 Identities = 97/313 (30%), Positives = 138/313 (44%), Gaps = 23/313 (7%)

Query: 20  QAWRWLRLLTSGDARELDAQHFRRWIGASPSHRAAYNDVKRRWDAIEAPARELLRLKPDA 79
           +A  WL  L SG A E D +  + W   S  H  A       W   EA   +  RL    
Sbjct: 13  EAADWLVQLQSGTATEADHRAVQAWCKRSAQHAQA-------WQRAEAILGDFRRLPTPV 65

Query: 80  ATVNATRPRAVTPPLRRRAF--LGAAVSAAAVAGVAVAPTGFWRGPDEWGADDRTAVGEQ 137
                 R        RR+A   LG  + AA  A +A   T +     +W AD  TAVGEQ
Sbjct: 66  TGETLRRLSRNGAVSRRQALHRLGLWLLAAPAAWLAWRETPW----QQWTADAHTAVGEQ 121

Query: 138 RTVVASGDVDVTLNTRTSVRRELVGGKMVGLDLIAGE----AAVDLRGVRSAFTVLAGVG 193
           RT+  +    V LNT T++       +   +DL+AGE    +A D        +V    G
Sbjct: 122 RTLTLADGSQVLLNTDTAIDITF-DARQRRIDLLAGEILLTSAKDPATPARPLSVRTPHG 180

Query: 194 RSTAQAGSFEVRRWDGKVLVTCLEGAV--RLEHPAGVRQLQARQQTVYHATSVSGIAGID 251
           ++TA+   F VR       V  LEGAV  R  H A    L+A +++ +    V   + ++
Sbjct: 181 QATARGTRFSVRIHGPLTQVAVLEGAVDTRPLH-ADSLLLKAGERSAFDGDRVLPASPLE 239

Query: 252 PDVASAWRRGMLVFKQTRLADALEEINRYRSGRVVLLKDAARDKPVSGRFAIASLDLALW 311
                AW  GML+ +  RLAD L+E+ RYR G V+    A R+  VSG F +A  D +L 
Sbjct: 240 TGDL-AWEHGMLLARDMRLADLLQELARYRPG-VLRCHPAVRELKVSGAFPLADTDASLR 297

Query: 312 QLQEAFELRARSL 324
            L +   +  + +
Sbjct: 298 LLSDTLPVNIQGM 310