Pairwise Alignments

Query, 171 a.a., Extracytoplasmic function (ECF) sigma factor VreI from Variovorax sp. SCN45

Subject, 178 a.a., no description from Variovorax sp. SCN45

 Score =  100 bits (249), Expect = 1e-26
 Identities = 58/152 (38%), Positives = 82/152 (53%)

Query: 1   MSEDTQLVLLNYLGRHYASLKQRLTRKLGNADDAGDALHDTWLRLKGNEDHGTVQNPGAY 60
           M++ ++  L  ++  HY  L +RLTR LG  D A DALHD WLRL   +    V NP AY
Sbjct: 1   MADRSRAALSAFVTSHYVQLVRRLTRHLGCPDLASDALHDAWLRLADIDSFHLVGNPDAY 60

Query: 61  LSRMAVNIAVDVQRRQSRLLSGDEVEELLEEIEDPAPGPARTAEIRSDLDAVLTLLDRMP 120
           + R A N A+D  R         E +  L  + D APGP   AE RSD+ AV   +  +P
Sbjct: 61  VYRAACNAALDRLRSARLRQHAHEADAELARVADHAPGPHHIAEARSDVMAVDRAMRHLP 120

Query: 121 ERRRAVALLVHAEGLTQNEAAQRLGVSLRTVE 152
            R R++ + +    +++ E A R G+SLR V+
Sbjct: 121 HRHRSILVGLRVHEMSRQEVAIRQGLSLRRVD 152