Pairwise Alignments

Query, 171 a.a., Extracytoplasmic function (ECF) sigma factor VreI from Variovorax sp. SCN45

Subject, 161 a.a., ECF subfamily RNA polymerase sigma-24 factor from Pseudomonas putida KT2440

 Score = 61.6 bits (148), Expect = 6e-15
 Identities = 51/152 (33%), Positives = 70/152 (46%), Gaps = 7/152 (4%)

Query: 16  HYASLKQRLTRKLGNADDAGDALHDTWLRLKGNEDHGTVQNPGAYLSRMAVNIAVDVQRR 75
           HY  L    TRKL +   A D  HD ++R+        V+ P AYL + A NIAVD  RR
Sbjct: 10  HYHELIGTWTRKLRSRQQAEDLTHDAFVRVL-ETPREQVEQPRAYLHQAARNIAVDGFRR 68

Query: 76  QSRLLSGDEVEELLEEIEDPAPGPARTAEIRSDLDAVLTLLDRMPERRRAVALLVHAEGL 135
           + R  + +   E  EE    +  P          D+V   L  +P   R V +    EGL
Sbjct: 69  EDRRQALER--EAFEEGATGSGDPEAYVHALELADSVERALAELPLNCRQVFIWQKLEGL 126

Query: 136 TQNEAAQRLGVSLRTVE----YELKRVHERVD 163
           TQ E A+R+G+S   VE      L+ + E +D
Sbjct: 127 TQAEIAERMGLSKNMVEKYMIRTLRHLREHLD 158