Pairwise Alignments

Query, 299 a.a., Transcriptional activator MetR from Variovorax sp. SCN45

Subject, 309 a.a., DNA-binding transcriptional regulator, homocysteine-binding from Pseudomonas putida KT2440

 Score =  237 bits (604), Expect = 3e-67
 Identities = 117/291 (40%), Positives = 179/291 (61%)

Query: 1   MLERLHLSIVQQVEKQGSLTAAAGVLNLTQSALSHSMKKLEQQLGTDIWLREGRSLRLTQ 60
           M++  HL  +  + +  SL  AA  L+LTQSALSH  + +E+++GT +++R+ R +R T 
Sbjct: 1   MIDLRHLRTLHALRETDSLHEAAERLHLTQSALSHQFRDMEERIGTPLFVRKSRPVRFTS 60

Query: 61  AGQYLLAVANRVLPQLNLAEERLGQFAQGERGALRIGMECHPCYQWLLKIVSPYLAAWPD 120
           AG  LL +A++VLPQ+   E  LG+ A G  G L I +ECH CYQWL+  V  +  AWP+
Sbjct: 61  AGLKLLQLADQVLPQIRNTERDLGKLAGGCAGRLHIAIECHSCYQWLMPSVDEFRGAWPE 120

Query: 121 VDVDVKQKFQFGGIGALFGYEIDLLVTPDPLHKPGLKFEPVFDYEQVLVVAKDHALASAA 180
           V++D+   F F  + AL   ++DL+VT DP+  PG+ + P+F YE +L +   HA+    
Sbjct: 121 VELDLASGFSFAPLPALERGDLDLVVTSDPVTLPGISYVPLFSYEALLAIDNHHAMRHKP 180

Query: 181 YVKPRQLTQEVLISYPVDIERLDIYNQFLLPAGVTPKRHKAIETTDIMLQMVASGRGVAA 240
           Y++P  +  + LI+YP++  RLDI+ +FL PA V P + +  E T +M+Q+VASGRGV  
Sbjct: 181 YLEPADIASQTLITYPIERTRLDIFTRFLDPADVEPAQVRTSELTVMMMQLVASGRGVCC 240

Query: 241 LPRWLVEEYAARMDVVPVRLGARGIAKQIFLGAREADTAIDYVRAFIELAR 291
           LP W V EY++R  V   RLG  G+   ++   R     + Y+R F+  A+
Sbjct: 241 LPNWAVHEYSSRGYVTAKRLGEHGLQANLYAALRSDMLEVPYMRDFLLTAK 291