Pairwise Alignments

Query, 284 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 349 a.a., Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  118 bits (296), Expect = 2e-31
 Identities = 90/250 (36%), Positives = 133/250 (53%), Gaps = 29/250 (11%)

Query: 6   TSILTLVAINVILALSLNLISGLCGQVSLGHAAFFGVGAYATALLAKAGANLWLTLPAAL 65
           T+ +T VA+     + L + +G  GQ++LG +AF GVGAY  AL   AG   W  L AAL
Sbjct: 51  TTFITAVAV-----IGLQICTGYAGQINLGQSAFMGVGAYGAALAMSAG---WDAL-AAL 101

Query: 66  LLAG----VCGLVVGFCSLRVRDDFLAIATMAAGFLFLGVVRTSDA--LGGE-------- 111
           L+ G    + G++ G  + R++  +LA+ T+AA  LF  +V       LGG         
Sbjct: 102 LIGGAGAALFGVMFGLTAARIKGFYLALTTIAAQALFHFLVLNLPQAWLGGAGGLHVESA 161

Query: 112 --LGISQIPESGLEGFYPYFVVLCAVAAGVFCTWVKKSWLGYAFEAVSADETAARSLGID 169
             LGIS   +  + GF   F+VL  +  G F   + +S  G +FEAV  D+ AA  +GI 
Sbjct: 162 TALGISLNNDRAIYGFS--FIVLVVMTIGAF--GIVRSRHGRSFEAVRDDDVAAGMMGIP 217

Query: 170 TPRFKLAAFALGTGLAGVAGCLYAYYLGTVGVEAFGFPVSVMILAMVVIGGMGSIWGSVL 229
               K  AF +    AGVAG L+   L  V VE F    ++ ++AM+++GG+GSI G+++
Sbjct: 218 VAATKARAFLVSAFYAGVAGGLWVVALRHVSVEQFTLFNAIWMIAMMIVGGLGSIVGALI 277

Query: 230 AAALLTLAPE 239
              L+ LA E
Sbjct: 278 GTVLIQLARE 287