Pairwise Alignments

Query, 313 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 286 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  145 bits (366), Expect = 1e-39
 Identities = 95/285 (33%), Positives = 145/285 (50%), Gaps = 4/285 (1%)

Query: 1   MSLFLNLASQGLINGAVYALIAIGLAMVFGLLRILHIAHAGLFALGGYLGLVVTNATGSF 60
           + L+L     GL  G +Y LIA+GL ++FGLL  ++ AH   F LG YL       TG+F
Sbjct: 2   LDLYLFQLLNGLGLGMIYFLIAVGLTIIFGLLNFVNFAHGAFFLLGAYLCYTAVAVTGNF 61

Query: 61  ALGLAVSMAVVAACGVLMYRLCYEPILEQPPYVPLIASVGMFLAIEELLRLVFGDHGLSY 120
            L L ++  VVAA    + RL  + I   P    ++ ++G+ L I+E   L++G  G + 
Sbjct: 62  WLALLIAPLVVAALAWAVERLLIKRIYHLPHTFQILVTLGIALIIQEASVLIWGPVGKNI 121

Query: 121 HVPP-LAGAIDLGGMRIKYAEIAVVVMACVLLGGLALFATRTRIGMAWRATVSEPRMAAS 179
            VPP L G + LG     Y  + ++  A ++  GL L   RTR G   RA        + 
Sbjct: 122 AVPPELRGVLILGDFIYPYYRLFLIGFAALIGIGLWLLLERTRFGALVRAGSESTETVSL 181

Query: 180 CGVSLRQVRHLNFAIGSAFAAAAGVMVGVLNNLVEPSMGAVPSYKALAIIVLGGLGNMGG 239
            G ++ ++  L FA+G   A  AGV+   L    +P +G      A  ++V+GG+G+ GG
Sbjct: 182 LGTNIFRLFSLTFALGVGLAGVAGVLFAPLRG-AQPFVGPEILGIAFVVVVIGGMGSFGG 240

Query: 240 TLVAALLLGLVEAFGATYLSNYLDRDSIAFAAMLCVLLVRPEGLF 284
            LV  LL+G+V++   +          + + AM  V+LVRP GLF
Sbjct: 241 ALVGGLLVGVVQSMMTSLWPQ--GASLMIYGAMAAVILVRPYGLF 283