Pairwise Alignments

Query, 388 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 394 a.a., Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein from Xanthobacter sp. DMC5

 Score =  120 bits (302), Expect = 5e-32
 Identities = 103/388 (26%), Positives = 173/388 (44%), Gaps = 24/388 (6%)

Query: 2   RSNSFFKRLALGLACAAGLAGFAGGAFAQGATTRIGFQAGLTGPAAADGNAGLAAARLAV 61
           R     +  A+ LA A         AFA     +IG     TGP+A  G+      +L V
Sbjct: 6   RLRPMLRAAAIMLATAVAGPALTSPAFAADPI-KIGSVVSATGPSAFLGDPEAKTLKLYV 64

Query: 62  EQINGAGGVNGKKLELVVYDDQGKPEQAVPIANRMV-GDGVRAVVSAGFSGPSRAAAPVF 120
           +++N  GG+ G+ +ELV+YDD G   +A   A R+V  D V A+V    +G + A  PVF
Sbjct: 65  DELNKKGGLLGRPVELVLYDDGGDANKARTFATRLVEDDKVVAMVGGTSTGATMAMIPVF 124

Query: 121 QRAKIPYIAAIAFAPEITRTGNYMFRVTSVGEVQGRAAAKLMGDVLHKKRAV----LLTI 176
           + A IP+++       I     ++F+     +    A  K+  D+  K R +    +++ 
Sbjct: 125 EEAGIPFVSLAGGIEIIEPVRAFIFKTPHTDKT---ACQKIFEDM--KARGITKIGMISG 179

Query: 177 KTDFGKTLAAGFKEAAPKFGVQLLKEYEYAPSDRQFGPLIASIK-ADNPDVIYATGFYFT 235
              FGK++     +   ++G+ ++ +  Y  +D    P +  IK     + +   GF   
Sbjct: 180 TDGFGKSMRNQCLKVIGQYGISVVADENYGATDSDMTPQLNKIKNTAGVEAVLNPGFGQG 239

Query: 236 AGPLVAQLRSAGVTADVVGAESLSSQQYIDIAGQAAEGTVI-TNVIDWGSQL-------P 287
              +       G+   +  +  ++S+ +I++AG AAEG  +    I  G +L       P
Sbjct: 240 PAIVTRNYAQLGIKLPLYQSHGVASKSFIELAGPAAEGVRLPAPAILIGDKLAANDPQKP 299

Query: 288 EIADFLKAYEKATNSKAEAAATSTHAAVVALAAAIRKAKSDDPDKIRAALET----LDVT 343
            +A++  +YEKAT           +  +  +A AI  AKS DP KIR ALE     + VT
Sbjct: 300 VVAEYKTSYEKATGQPVSTFGGYGYDGIQLVARAIESAKSADPKKIRDALEATKGYVGVT 359

Query: 344 TAIGRISFNKLHEVKKNFPLSIVRNGKW 371
                   + L     +F + ++RNG W
Sbjct: 360 GIYTFAPADHLGLGTDSFRMLVIRNGDW 387