Pairwise Alignments

Query, 320 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 313 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  135 bits (339), Expect = 2e-36
 Identities = 92/302 (30%), Positives = 151/302 (50%), Gaps = 12/302 (3%)

Query: 8   IRAGLKPRHFQLLVALDDYRQIGKVAALMNVTTPAVSKTLTELEEGLGMKLFERSVRGVT 67
           I + L  RH +LL+ LD++R +   A+ + +T P  SK L E+E   G  LF R+ RG+ 
Sbjct: 8   IMSRLHARHLRLLIELDEHRSLLGAASSVGLTQPGASKALQEIETTFGTVLFNRTNRGLE 67

Query: 68  PTAFGECMIRGAKMMMRGLAEVGDELHALSHGVTGKIRIGVLPSSAISLLPASLLKLKKL 127
           PTA G C IR A+++   +A +  +L A+  GV G++ +G +   A+ LL  ++ +L  +
Sbjct: 68  PTAAGHCAIRYARLLQTDIANLRHDLDAILRGVGGRLAVGAI-MGAVPLLMKAVSQLASI 126

Query: 128 SPATPAIVREATMDVLLHEMRSGSIELIL-----GTLPVRKADTDVDEEVLFEDQTTVVV 182
            P     + E T   LL ++ SG +++ L        P   A T V +E L      V+ 
Sbjct: 127 QPQMSFEIIEDTSQSLLTQIESGRLDIALCRTSVSNTPQLFASTFVQDETL-----AVIA 181

Query: 183 RSGHPLALRESLDWIDLSPYPWILPPEGSLLREPLSQWFRDSGLPEPPNVIETLSLSFIR 242
              HPL    SL   DL+   WI+      +R  L + F D+GL  P +++ET S+    
Sbjct: 182 NIDHPLKHAPSLSLADLAESRWIVYRANMPMRVQLEREFHDAGLRFPLHLVETTSILATL 241

Query: 243 SYLAH-SDAIATMPASTSKELAKSRFVEVLPLPLPSLVRPVGLLWSMGRPLSPSARLFRE 301
           S L +  D +A +    +++ A ++ V +LPL + S+  P  L+   G   +P+     E
Sbjct: 242 SLLQNRPDFVALVSIDVARQCAMNQQVSILPLSMGSVSDPYELVTRKGSQATPAMDTLTE 301

Query: 302 CL 303
            L
Sbjct: 302 LL 303