Pairwise Alignments

Query, 320 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 397 a.a., HTH-type transcriptional regulator GalR from Pseudomonas putida KT2440

 Score =  145 bits (366), Expect = 2e-39
 Identities = 93/296 (31%), Positives = 143/296 (48%), Gaps = 1/296 (0%)

Query: 15  RHFQLLVALDDYRQIGKVAALMNVTTPAVSKTLTELEEGLGMKLFERSVRGVTPTAFGEC 74
           R  Q+ V L + R +  VA    ++ PAVS  L  LE G G  LF R+ RG+ PT     
Sbjct: 102 RRLQVFVKLCETRHMQTVARHFGLSQPAVSAALKVLEGGCGQPLFVRTSRGLQPTVASRD 161

Query: 75  MIRGAKMMMRGLAEVGDELHALSHGVTGKIRIGVLPSSAISLLPASLLKLKKLSPATPAI 134
           ++   +  +  L  +  +L A+   + G + +G LP     +LP ++L+     P    +
Sbjct: 162 ILFPIRRALNELRLLDSDLSAMQGTLRGVVHVGALPLGRSRILPDAILRFTAQHPQVRVV 221

Query: 135 VREATMDVLLHEMRSGSIELILGTLPVRKADTDVDEEVLFEDQTTVVVRSGHPLALRESL 194
             E+  D+L  E+R G ++ +LG L      +D+  E L  ++  V+ R GHPL L   L
Sbjct: 222 TNESPFDLLATELRVGDVDFVLGALRPHDYASDLVGEPLINEEMVVLARRGHPL-LHTHL 280

Query: 195 DWIDLSPYPWILPPEGSLLREPLSQWFRDSGLPEPPNVIETLSLSFIRSYLAHSDAIATM 254
               +    W+LP  GS  R+ L   F  +GL  P  V+E+  L+ IR  L  SD +A +
Sbjct: 281 TLKGVHQARWVLPRAGSPARQLLDNCFAAAGLTAPWPVVESADLAVIRGLLVRSDMLAAV 340

Query: 255 PASTSKELAKSRFVEVLPLPLPSLVRPVGLLWSMGRPLSPSARLFRECLRKVIEQQ 310
            A        S  ++ LPL LP   R +GL+   G   SP+A     C+R+VI +Q
Sbjct: 341 SAHQLAYEIASGELQRLPLALPGTARAIGLMQRSGCLQSPAAVALMACIRQVITEQ 396



 Score = 34.3 bits (77), Expect = 5e-06
 Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 3/62 (4%)

Query: 28 QIGKVAALMNVTTPA---VSKTLTELEEGLGMKLFERSVRGVTPTAFGECMIRGAKMMMR 84
          ++G V+    V   A   V++ + ELE    + LFER   G+  T +GEC++  A+ ++ 
Sbjct: 20 ELGSVSRATEVLFRAQSVVTRAIAELEARFAVPLFERHANGMRLTDYGECLLPRAQRVLA 79

Query: 85 GL 86
           L
Sbjct: 80 EL 81