Pairwise Alignments

Query, 320 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 307 a.a., LysR family transcriptional regulator YdcI from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  141 bits (356), Expect = 2e-38
 Identities = 88/294 (29%), Positives = 150/294 (51%), Gaps = 1/294 (0%)

Query: 12  LKPRHFQLLVALDDYRQIGKVAALMNVTTPAVSKTLTELEEGLGMKLFERSVRGVTPTAF 71
           ++ RH    VA+     +G+ A  +N++ PA+SKTL ELE+  G +LFER   G   T  
Sbjct: 11  IRLRHLHTFVAVAQQGTLGRAAETLNLSQPALSKTLNELEQLTGTRLFERGRLGAQLTVP 70

Query: 72  GECMIRGAKMMMRGLAEVGDELHALSHGVTGKIRIGVLPSSAISLLPASLLKLKKLSPAT 131
           GE  +  A  ++  L   G  L+         +R+G LP++A+ +LPA++ +  +   +T
Sbjct: 71  GEQFLTHAVKVLDALNTAGQALNRKEDASADVVRVGALPTAALGILPAAIGRFHQQQKST 130

Query: 132 PAIVREATMDVLLHEMRSGSIELILGTLPVRKADTDVDEEVLFEDQTTVVVRSGHPLALR 191
              V      +LL  ++SG I+L +G +   +    ++ E+LF +   +VVR GHPL L+
Sbjct: 131 SLQVATMNNTMLLAGLKSGEIDLGIGRMSDPELMGGLNYELLFLESLKLVVRPGHPL-LQ 189

Query: 192 ESLDWIDLSPYPWILPPEGSLLREPLSQWFRDSGLPEPPNVIETLSLSFIRSYLAHSDAI 251
           E++    +  +P ++ P+G++ R+      +  G   P   IETLS S  R      D +
Sbjct: 190 ETITLSRVMEWPVVVSPKGTVPRQNAEALLQSQGCKMPAGCIETLSASLSRQLTVDYDYV 249

Query: 252 ATMPASTSKELAKSRFVEVLPLPLPSLVRPVGLLWSMGRPLSPSARLFRECLRK 305
             +P+   KE  +   +  LP+P  S   P+G+L  +  PLS  A++    +RK
Sbjct: 250 WFVPSGAVKEDLRQATLVSLPVPTQSAGEPIGILTRVDIPLSTGAQMLIAAIRK 303