Pairwise Alignments

Query, 320 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 307 a.a., putative transcriptional regulator LYSR-type (VIMSS) from Escherichia coli BW25113

 Score =  127 bits (319), Expect = 3e-34
 Identities = 81/294 (27%), Positives = 145/294 (49%), Gaps = 1/294 (0%)

Query: 12  LKPRHFQLLVALDDYRQIGKVAALMNVTTPAVSKTLTELEEGLGMKLFERSVRGVTPTAF 71
           ++ RH    VA+     +G+ A  +N++ PA+SKTL ELE+  G +LFER  +G   T  
Sbjct: 11  IRLRHLHTFVAVAQQGTLGRAAETLNLSQPALSKTLNELEQLTGARLFERGRQGAQLTLP 70

Query: 72  GECMIRGAKMMMRGLAEVGDELHALSHGVTGKIRIGVLPSSAISLLPASLLKLKKLSPAT 131
           GE  +  A  ++  +   G  LH         +R+G LP++A+ +LP+ + +  +    T
Sbjct: 71  GEQFLTHAVRVLDAINTAGRSLHRKEGLNNDVVRVGALPTAALGILPSVIGQFHQQQKET 130

Query: 132 PAIVREATMDVLLHEMRSGSIELILGTLPVRKADTDVDEEVLFEDQTTVVVRSGHPLALR 191
              V   +  ++L  +++G I++ +G +   +  T ++ E+LF +   +VVR  HPL L+
Sbjct: 131 TLQVATMSNPMILAGLKTGEIDIGIGRMSDPELMTGLNYELLFLESLKLVVRPNHPL-LQ 189

Query: 192 ESLDWIDLSPYPWILPPEGSLLREPLSQWFRDSGLPEPPNVIETLSLSFIRSYLAHSDAI 251
           E++    +  +P ++ PEG+  R+      +  G   P   IETLS S  R      D +
Sbjct: 190 ENVTLSRVLEWPVVVSPEGTAPRQHSDALVQSQGCKIPSGCIETLSASLSRQLTVEYDYV 249

Query: 252 ATMPASTSKELAKSRFVEVLPLPLPSLVRPVGLLWSMGRPLSPSARLFRECLRK 305
             +P+   K+  +   +  LP+P      P+G+L  +    S   +L    +RK
Sbjct: 250 WFVPSGAVKDDLRHATLVALPVPGHGAGEPIGILTRVDATFSSGCQLMINAIRK 303