Pairwise Alignments

Query, 530 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 533 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  147 bits (372), Expect = 7e-40
 Identities = 142/526 (26%), Positives = 235/526 (44%), Gaps = 53/526 (10%)

Query: 21  VLAAWTVAAQP--RQGGTLTWLVNPVPASIVPLTTTAGGNAEIGPKIVEGLLTYDY--DL 76
           +LAA  +A  P  +   TL +     PA   P   T+G + +   + V   LT       
Sbjct: 10  LLAAGLLACMPLAQAASTLVYCSEASPAGFDPSQYTSGTDFDASAETVFNRLTQFKRGGT 69

Query: 77  KPKPLLATAWSQSKDGLQYTFELRKGVKWHDG------KDFTSADVAFSILTL------- 123
           + +P LAT+W  S+DGL YTF LR GVK+H        +DF + DV F+   L       
Sbjct: 70  EVEPGLATSWDISQDGLTYTFHLRDGVKFHTTDFFSPTRDFNADDVLFTFNRLLDAQSPF 129

Query: 124 KQVHPRGRGTFAN------VVDVKTPDANTAVIVLSKPSPFLLTALASTESPI-----VP 172
           +Q +P     F +      +  V   D +T    L+      +  LA + + +       
Sbjct: 130 RQAYPSESPYFTDMGLNTTIKSVDKLDDHTVRFNLNNVDASFVQNLAMSFASVQSAEYAA 189

Query: 173 KHLYEGTDIASNKYNSAPVGTGPFVFKEWVQGSHIILERNPNYWDKPKPYLDRVVVRFVL 232
           + L +G    + + N  PVGTGPFVFK + + S I    N  YW      LD +V     
Sbjct: 190 QLLKQGK---AEEINQKPVGTGPFVFKRYQKDSQIRYVANKQYWKPEDVKLDNLVFAITP 246

Query: 233 DSAARAAALESGAADLANGTGGIPL-SDVERFGKLPGVQIDTRISPYLGSHQQIYFNLDT 291
           D+A+R   L++G   ++    G P  +D+E   + P + +  +    LG    + +N+  
Sbjct: 247 DAASRLQKLKAGECQVS----GYPRPADIEVMKQDPNLHVLQQAGFNLGF---LAYNVTH 299

Query: 292 PALQKLEVRRAIAQAIDVNAFAKTVWYGYGTLSASPIGKGISRYHDASIQPYPFNPKEAE 351
           P L +L+VR+A+  AID  A  K V+   G L+ + +      Y D +I+  P++P +A+
Sbjct: 300 PPLDQLKVRQALDMAIDKPAIIKAVYQSAGQLAQNALPPAQWSY-DPTIKDAPYDPTKAK 358

Query: 352 AALDAAGFKRGAGGTRLKLRVL-----YNPFQERRAADFVRQSLGRIGIDATVESYDFAT 406
           A L  AG    A GT + L  +      NP   R +A  ++Q   ++GI A + SY++  
Sbjct: 359 ALLKEAGV---APGTTVNLWAMTVQRASNP-NARMSAQMIQQDWEKVGIKANIVSYEWGE 414

Query: 407 YVTKAYTDRAFDITLESLTNLFDPTVGVQRVFWSKNFKVGLPFSNAAHYVNPEVDRLLEA 466
           Y+ +A       +      +  DP   +  ++     K     SN A + NP  D+L++ 
Sbjct: 415 YIKRAKNGEHDAMIYGWTGDNGDPDNWLGVLYSCAAVK----GSNYAKWCNPAYDKLVQQ 470

Query: 467 AAVEVDEGKRRQLFVDFQNIVHRDIPSIELGANPAITVATKKVRDY 512
           A V  D  +R + +   Q I+   +P   +  +       K+V+D+
Sbjct: 471 AKVSNDREQRIKWYQQAQKILKEQVPITPIANSTVFQPLRKEVKDF 516