Pairwise Alignments

Query, 530 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 535 a.a., dipeptide ABC transporter substrate-binding protein DppA from Escherichia coli ECRC62

 Score =  147 bits (370), Expect = 1e-39
 Identities = 135/529 (25%), Positives = 230/529 (43%), Gaps = 50/529 (9%)

Query: 22  LAAWTVAAQPRQGGTLTWLVNPVPASIVPLTTTAGGNAEIGP-KIVEGLLTYDYDLKPK- 79
           L A TVAA   Q  TL +     P    P   T+G   +     +   L+ +        
Sbjct: 17  LVAMTVAASV-QAKTLVYCSEGSPEGFNPQLFTSGTTYDASSVPLYNRLVEFKIGTTEVI 75

Query: 80  PLLATAWSQSKDGLQYTFELRKGVKWHDGKDF------TSADVAFSILTLKQV------- 126
           P LA  W  S+DG  YTF LRKGVKWHD K+F       + DV FS    K         
Sbjct: 76  PGLAEKWEVSEDGKTYTFHLRKGVKWHDNKEFKPTRELNADDVVFSFDRQKNAQNPYHKV 135

Query: 127 ------HPRGRGTFANVVDVKTPDANTAVIVLSKPSPFLLTALASTESPIVPKHLYEGTD 180
                 +  G G    + +VK  D NT   VL++P    L  LA   + I+ K   +   
Sbjct: 136 SGGSYEYFEGMGLPELISEVKKVDDNTVQFVLTRPEAPFLADLAMDFASILSKEYADAMM 195

Query: 181 IAS--NKYNSAPVGTGPFVFKEWVQGSHIILERNPNYWDKPKPYLDRVVVRFVLDSAARA 238
            A    K +  P+GTGPF  +++ + S I  +    YW   KP +D +V     D++ R 
Sbjct: 196 KAGTPEKLDLNPIGTGPFQLQQYQKDSRIRYKAFDGYWG-TKPQIDTLVFSITPDASVRY 254

Query: 239 AALESGAADLANGTGGIPLSDVER-----FGKLPGVQIDTRISPYLGSHQQIYFNLDTPA 293
           A L+     +        ++ +++       ++PG+ +      YL       +N+    
Sbjct: 255 AKLQKNECQVMPYPNPADIARMKQDKSINLMEMPGLNVG-----YLS------YNVQKKP 303

Query: 294 LQKLEVRRAIAQAIDVNAFAKTVWYGYGTLSASPIGKGISRYHDASIQPYPFNPKEAEAA 353
           L  ++VR+A+  A++ +A  K V+ G G  + + I   +  Y+D  +Q Y ++P++A+A 
Sbjct: 304 LDDVKVRQALTYAVNKDAIIKAVYQGAGVSAKNLIPPTMWGYND-DVQDYTYDPEKAKAL 362

Query: 354 LDAAGFKRGAGGTRLKLRVL--YNPFQERRAADFVRQSLGRIGIDATVESYDFATYVTKA 411
           L  AG ++G       + V   YNP   RR A+ ++    ++G+ A + +Y++  Y+ +A
Sbjct: 363 LKEAGLEKGFSIDLWAMPVQRPYNP-NARRMAEMIQADWAKVGVQAKIVTYEWGEYLKRA 421

Query: 412 YTDRAFDITLESLTNLFDPTVGVQRVFWSKNFKVGLPFSNAAHYVNPEVDRLLEAAAVEV 471
                  + +    +  DP      +F     + G   SN + +     + L++ A    
Sbjct: 422 KDGEHQTVMMGWTGDNGDPDNFFATLFSCAASEQG---SNYSKWCYKPFEDLIQPARATD 478

Query: 472 DEGKRRQLFVDFQNIVHRDIPSIELGANPAITVATKKVRDYA--PTGEH 518
           D  KR +L+   Q ++H   P++ +  +       K+V+ Y   P G+H
Sbjct: 479 DHNKRVELYKQAQVVMHDQAPALIIAHSTVFEPVRKEVKGYVVDPLGKH 527