Pairwise Alignments
Query, 976 a.a., hypothetical protein from Variovorax sp. SCN45
Subject, 825 a.a., Outer membrane autotransporter from Pseudomonas putida KT2440
Score = 125 bits (314), Expect = 1e-32
Identities = 223/909 (24%), Positives = 346/909 (38%), Gaps = 172/909 (18%)
Query: 105 AGVFAVRLQNGGDFSNAFGATVSGTGGGITMINAPGMGINRGQILASDGAGIELRAGGGV 164
+G + + GD F A+ SG G A I+ +AS G + G G+
Sbjct: 46 SGTAPALVDSSGDNRLVFPASGSGAITGDVTFGAGKDSID----MASGSVGGNVNQGAGI 101
Query: 165 SNY--AGAQIRGGTAGVYLINSTDALRNEGIIAATNGAGVHIEGGAVKLRNESG--ASID 220
++ +G I G +N D L H+ GG +K +SG A +D
Sbjct: 102 DDFVMSGGVIEGN------LNQGDGLDT-----------FHMSGGWIKGTFDSGDYAEMD 144
Query: 221 GTSFGVQMVNGSQEVLNTGRIGASAGVGVDLNAGGTVVNGPGAQIAGSTGGVHTVNGSAS 280
G + + G VD N G+ GG +V+G
Sbjct: 145 DGRIGNVNMRLDENTF------IMRGGSVDRNVITAFDKDYIEVFEGNIGGNISVSGGDD 198
Query: 281 -VITNGLISGGDYSVQFGTGNGLLQMDTGA-ELRGDALGGDTSRIL---------LLGNG 329
V+ +G GGD V TGN D G R DA GD + +L + +G
Sbjct: 199 QVLVHGGQVGGD--VLLSTGNDRFTWDGGRIGGRVDAGPGDDTALLKGLTPEVLSITLDG 256
Query: 330 YAANNFLRF-------GQLTVTDERWTLVGRTEARITDVQSGQLLIGDPAFTGTAPVLVG 382
N+ L F G V ER L + + D +++G
Sbjct: 257 GEGNDSLTFDASQPAGGAHYVNWERVALNNGSRLALDDT-----------------LVLG 299
Query: 383 DSVNVAAGAVLAGYASRIDGSVDNKGTLYVGNAYPYAGVVAPSQLDIGGALSNVTGTVVL 442
DS N + G++ +SRI +G + AP Q A+SN GT+ L
Sbjct: 300 DS-NSSTGSLALDASSRI---TSRQGVITA---------FAPGQR---AAISNA-GTLDL 342
Query: 443 TRGEPFGNTLNVAGSYAGG-GALRLGARLDEATQGPLANQVTDRMLV-RGAAAGRTVVDV 500
T G L + G Y G G LRL + L A G +DR++V RGA AG T V +
Sbjct: 343 TAGNDAMGRLRIEGDYTGNNGTLRLNSVL--AGDGA----ASDRLVVSRGAIAGSTQVLI 396
Query: 501 TAASTPGANGIITAAEGGPDAGVSIVQVAGASSEQAFALSRPYVTGGTPYQYKLFAYGPG 560
+ GA TA G + +V+ ++ A A + Y Y+LF
Sbjct: 397 NNLNGAGA---ATAQNG-----IQVVEARNGATSTATAFVQTQRLSAGAYDYRLF----- 443
Query: 561 ASNGAASAAQNLVGFPGSYWDYRLQRGYETAVPLPPGIVVAVPPPPPPPPPPPPPPPPGP 620
G + ++N W R V PP P P P P PP
Sbjct: 444 -KGGVTAGSEN-------SWYLR---------------STLVAPPAPAPVPAPGEPPVIA 480
Query: 621 PGPPSPPPEPPPPPSPPPPVGPPVGGGGRYELAPQVPGYLVLPGAVFNAGWQDMDSLHRR 680
P P P P + P PV G P+VP Y P Q + + H+R
Sbjct: 481 PAVTPPVAAPAPGQAELP---APVQGQSLPLYRPEVPVYAAAPRGAAIIARQALGTFHQR 537
Query: 681 LGEIRDSQRAGIGENS--EAFARAYGGSSRYR------SDLAFSNYGYGAKQDYAALQVG 732
G+ Q GE++ ++ +AYGG+ R + L YG+ QD A +VG
Sbjct: 538 QGD----QLLLQGESALPASWGQAYGGTLRQQWSGTVSPSLDGDLYGFKVGQDLYA-KVG 592
Query: 733 ASAVIARDNGGATWRLGGALNVGRSRVVPDA---------RDISRTDIDMQTLSGIATWL 783
DNG +R + V SR+ D R + +D ++ T +
Sbjct: 593 -------DNG---YRQHVGIYVSHSRLDADVKGFALAVHDRSVGDLKLDGDSVGTYWTLV 642
Query: 784 HPSGAYIDGLVSIGRVSADVRTDIYQGQTVASPHGRRHAVSIEGGWPIALGDSGMQIEPQ 843
P GAY+D ++ R+ R++ +G T+ + G S+E G+PI L + ++EPQ
Sbjct: 643 GPQGAYLDAVLQYTRLDGRARSE--RGDTL-NLDGHAWTASLESGYPITLSER-WRVEPQ 698
Query: 844 VQYAWQRLRLRSFTD-IDGVRYDAHAESQGVLRVGARLTRPFQTAEGTRVTPYLRLDYLH 902
Q Q++ L S D + + +DA E G R+G RL F + G + P+ +++ H
Sbjct: 699 AQLIAQKVALESARDSVSRISHDAQVELTG--RLGLRLEGAFTGSSGRLLQPFAQVNLWH 756
Query: 903 GTGGNGSARVGGVN-FATGQFGSGWRVGAGVSGMLTRQLSVYADLSWQDRANGGGWRSWM 961
G GG + + T + ++ +GV + LS++ + + + +
Sbjct: 757 GDGGRDTLTFDDADKIKTDYRYTSVQLESGVVAQVNEALSLHGGVQYTANLDSRQQEASG 816
Query: 962 FSGGLRYAF 970
+ G+R+ F
Sbjct: 817 VNLGVRWQF 825
Score = 35.4 bits (80), Expect = 2e-05
Identities = 62/264 (23%), Positives = 93/264 (35%), Gaps = 48/264 (18%)
Query: 71 IGANVTVDGAGGEALVGQNQ--------------RWSVNNAGTLNSLGAG---------- 106
IG N++V G + LV Q W G G G
Sbjct: 187 IGGNISVSGGDDQVLVHGGQVGGDVLLSTGNDRFTWDGGRIGGRVDAGPGDDTALLKGLT 246
Query: 107 --VFAVRLQNGGDFSNAFGATVSGTGGGITMINAPGMGINRGQILASDGA---GIELRAG 161
V ++ L +GG+ +++ S GG +N + +N G LA D G +
Sbjct: 247 PEVLSITL-DGGEGNDSLTFDASQPAGGAHYVNWERVALNNGSRLALDDTLVLGDSNSST 305
Query: 162 GGVSNYAGAQI--RGGTAGVYLINSTDALRNEGIIAATNG----AGVHIEG------GAV 209
G ++ A ++I R G + A+ N G + T G + IEG G +
Sbjct: 306 GSLALDASSRITSRQGVITAFAPGQRAAISNAGTLDLTAGNDAMGRLRIEGDYTGNNGTL 365
Query: 210 KLRN---ESGASIDGTSFGVQMVNGSQEVLNTGRIGASAGVGVDLNAGGTVVNGPGAQIA 266
+L + GA+ D + GS +VL GA A + G VV +
Sbjct: 366 RLNSVLAGDGAASDRLVVSRGAIAGSTQVLINNLNGAGAATAQN---GIQVVEARNGATS 422
Query: 267 GSTGGVHTVNGSASVITNGLISGG 290
+T V T SA L GG
Sbjct: 423 TATAFVQTQRLSAGAYDYRLFKGG 446
Score = 26.9 bits (58), Expect = 0.006
Identities = 42/166 (25%), Positives = 66/166 (39%), Gaps = 44/166 (26%)
Query: 64 ANSSTATIGANVTVDGAGGEALV---GQNQRWSVNNAGTLNSLGAGVFAVRLQNGGDFSN 120
+NSST ++ + + + ++ QR +++NAGTL+ RL+ GD+
Sbjct: 301 SNSSTGSLALDASSRITSRQGVITAFAPGQRAAISNAGTLDLTAGNDAMGRLRIEGDY-- 358
Query: 121 AFGATVSGTGGGITMINAPGMGINRGQILASDGAGIELRAGGGVSNYAGAQIRGGTAGVY 180
+G G + + +LA DGA + RG AG
Sbjct: 359 ------TGNNGTLRL----------NSVLAGDGAASDRLVVS----------RGAIAG-- 390
Query: 181 LINSTDALRN--EGIIAATNGAGVHIEGGAVKLRNESGASIDGTSF 224
ST L N G AAT G+ + V+ RN GA+ T+F
Sbjct: 391 ---STQVLINNLNGAGAATAQNGIQV----VEARN--GATSTATAF 427