Pairwise Alignments

Query, 554 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 534 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  152 bits (384), Expect = 3e-41
 Identities = 124/457 (27%), Positives = 212/457 (46%), Gaps = 33/457 (7%)

Query: 104 PLLATAWQVSPDGLKYSFKLRPGVKFHDG------HDFTAEDVRYSVLTQ-------KKQ 150
           P LAT W +SPDG+ Y+F LR GVKFH         DF A+DV ++           +K 
Sbjct: 74  PALATKWDISPDGMTYTFHLREGVKFHSNKEFKPTRDFNADDVLFTFNRMLDPDHPFRKA 133

Query: 151 GP------RGRITLANVERVDTPDPLTAVIVLSRPAPFLLKSLSSAELPIVPAHRYSDGE 204
            P       G     N+ +V+  DP T V+ L+      +++++ +   I+ A       
Sbjct: 134 YPTEFPYFNGMSLNKNIAKVEKTDPHTVVMTLNTVDAAFIQNIAMSFAAILSAEYAEQLL 193

Query: 205 PLGNPNIT--APVGTGPFVFEQWVRGSHLVLRKNPNYWRKGYPHLDRVIVKFVRDPAAIS 262
             G P+     P+GTGPFVF+++ + S +    N  YW      LD++I     D +   
Sbjct: 194 KAGKPSDINQKPIGTGPFVFQRYQKDSQIRYVANKQYWDPSRVKLDQLIFAINTDASVRV 253

Query: 263 TAVETGEVDVAQGVGLADLERLAGNPKLKVDDTYDGFLNNASFLEFNVDNPVLANPKVRH 322
             ++ GE  V      AD++ L  +P LK+  T  GF  N  ++ +NV +      +VR 
Sbjct: 254 QKLKAGECQVTLHPRPADVDALKADPNLKL-LTKPGF--NLGYIAYNVRHKPFDQLEVRQ 310

Query: 323 AIAQAIDRNFIRNTIYYKRVEV-VNSPIPRVLSDYYDDSTFRYPFDVAAANRLLDEAGQP 381
           A+  A+++  I N +Y    ++ VN+  P   S  YDDS     ++   A  LL  AG  
Sbjct: 311 ALDMAVNKQSILNAVYQGAGQLAVNAMPPTQWS--YDDSIKDAAYNPEKAKELLKAAGVK 368

Query: 382 KQANGQRFSLRLSYIPGAEFKRTTDYLRSALARVGIKVEVVDGDLPTFLKHVYSTRDFDI 441
           +      +++ +        K   + L+S  A++G+KV++V  +   ++K      + D+
Sbjct: 369 EGTEITLWAMPVQRPYNPNAKLMAEMLQSDWAKIGLKVKIVSYEWGEYIKRT-KNGEHDV 427

Query: 442 NING-LGRLFDPTVGVQRIYWGDGVRNPLIWINAAHYDNPQVDELFRQAAVELDTGKRAA 500
           ++ G  G   DP   +  +Y  D +       N + + +P  D+L +QA V  D  +R  
Sbjct: 428 SLIGWTGDNGDPDNWLGTLYSCDAIGGN----NYSMWCDPAYDKLIKQAKVVTDREQRTV 483

Query: 501 QFKQIQQIVGRELPVLPLVSVPLIQVYSARVHNLNNS 537
            +KQ QQ++ +++P+ P+    + Q  SA+V     S
Sbjct: 484 LYKQAQQLLKQQVPITPVAHSTVNQPLSAKVEGFKVS 520