Pairwise Alignments

Query, 554 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 533 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  473 bits (1216), Expect = e-137
 Identities = 256/522 (49%), Positives = 326/522 (62%), Gaps = 3/522 (0%)

Query: 36  RRLIHLALAALPFAAAAQTPVEGGTLTYAVSQEPTSLVSFLDTKTDNRNVSAKVTEGLLR 95
           R  +  AL A   AA A  P   GTLT   + EPT+LV+  +  T   +VSAKVTEGLL+
Sbjct: 11  RSALLAALLAAGLAAHAAPPSHSGTLTLLSTSEPTALVTIGNVATPILSVSAKVTEGLLK 70

Query: 96  YDAKFTPQPLLATAWQVSPDGLKYSFKLRPGVKFHDGHDFTAEDVRYSVLTQKKQGPRGR 155
           YD    PQP LAT W +SPDGL Y+F LR GVK+HDG DFT+ DV YS+   KK  PRGR
Sbjct: 71  YDYDVNPQPQLATKWVISPDGLTYTFTLRQGVKWHDGKDFTSADVAYSIELLKKIHPRGR 130

Query: 156 ITLANVERVDTPDPLTAVIVLSRPAPFLLKSLSSAELPIVPAHRYSDGEPLGNPNITAPV 215
            T AN+  +DTPD  TA++ LS+PAP+L+++L + E PIVP H Y   +P  NPN  AP+
Sbjct: 131 NTFANLTAIDTPDKYTAILRLSKPAPYLIRALVATETPIVPKHIYEGTDPANNPNNNAPI 190

Query: 216 GTGPFVFEQWVRGSHLVLRKNPNYWRKGYPHLDRVIVKFVRDPAAISTAVETGEVDVA-- 273
           GTGPF F++WVRGSH+V  +N +YW K  P +D++IV+FV DPAA + A ETG VD+   
Sbjct: 191 GTGPFKFKEWVRGSHIVYERNNDYWDKPKPFVDQLIVRFVTDPAAAAVAFETGTVDLGYR 250

Query: 274 QGVGLADLERLAGNPKLKVDDTYDGFLNNASFLEFNVDNPVLANPKVRHAIAQAIDRNFI 333
             V LADLERL   P L+ +   + + +N + LEFN+DN    N KVR A+A AIDRN I
Sbjct: 251 TPVPLADLERLKKVPALRFETKGNSYSSNVTRLEFNLDNEYFKNEKVRQAVAHAIDRNVI 310

Query: 334 RNTIYYKRVEVVNSPIPRVLSDYYDDSTFRYPFDVAAANRLLDEAGQPKQANGQRFSLRL 393
              + Y   +V  SPI   L  ++D +   Y FDV  AN LLDEAG PK+A G RFS+ L
Sbjct: 311 VKVVNYGYGQVSYSPIAPGLKAFHDPAPSPYAFDVKKANALLDEAGFPKKAGGVRFSVPL 370

Query: 394 SYIP-GAEFKRTTDYLRSALARVGIKVEVVDGDLPTFLKHVYSTRDFDININGLGRLFDP 452
            + P GA+  R  DYLRSALAR+GI V V   D   F+K +Y+ RDF    NG   LFDP
Sbjct: 371 DFNPIGADGPRLADYLRSALARIGIAVTVRAQDPSAFIKRIYTDRDFAFTHNGASNLFDP 430

Query: 453 TVGVQRIYWGDGVRNPLIWINAAHYDNPQVDELFRQAAVELDTGKRAAQFKQIQQIVGRE 512
           TVGVQR+YW       + + N  HY NP VD+L   AAVE D GKR   FK  Q  V R+
Sbjct: 431 TVGVQRLYWSKNFIKGVPFSNGTHYQNPVVDKLLEDAAVENDPGKRLKLFKDFQDTVARD 490

Query: 513 LPVLPLVSVPLIQVYSARVHNLNNSIDLMAGDLADAWVEPRK 554
           +P L L     I + + RVH+ + + D +  +LAD WV+  K
Sbjct: 491 VPDLNLYQPVFITIANQRVHDHSLTADGVESNLADVWVDDAK 532