Pairwise Alignments

Query, 554 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 521 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  132 bits (332), Expect = 3e-35
 Identities = 137/521 (26%), Positives = 226/521 (43%), Gaps = 78/521 (14%)

Query: 38  LIHLALAALPFAAAAQTPVEGGTLTYAVSQEPTSLVSFLDTKTDNRNVSAKVTEGLLRYD 97
           ++  AL A   +A+AQT      L+   +   +S+   L+    +R+++    + ++   
Sbjct: 7   IVAAALLATGVSASAQT------LSIGFADPVSSVDPELNNHAGDRSLALHFWDSIINSR 60

Query: 98  AKFTPQPLLATAWQVSPDGLKYSFKLRPGVKFHDGHDFTAEDVRYSVLTQKKQGPRGRIT 157
                +P LA++W+   D   + FKLR  +K+ DG  F+A+D+ +S   Q+ +   G + 
Sbjct: 61  DGGKLEPALASSWKALDDKT-WEFKLRTDIKWQDGTPFSADDIVFSF--QRSRNVPGSVA 117

Query: 158 -----LANVERVDTPDPLTAVIVLSRPAPFLLKSLSSAELPIVPAHRYSDGEPLGNPNIT 212
                L  VE V   DP T ++  + P P L   L  A + IV  H     +        
Sbjct: 118 SYSGALRTVESVTAKDPATLIVKTNTPNPML--PLEIASIYIVSKHVGEKSKTEDYNAGR 175

Query: 213 APVGTGPFVFEQWVRGSHLVLRKNPNYWRKGYPHLDRVIVKFVRDPAAISTAVETGEVDV 272
           A VGTGP+ F  +V G   V  +NP Y+    P  ++V  +F+ + AA + A+  G+VDV
Sbjct: 176 AVVGTGPYKFVSYVPGDRTVFERNPGYYGPK-PLWEKVNYRFINNGAARTAALLAGDVDV 234

Query: 273 AQGVGLADLERLAGNPKLKVDDTYDGF----------LNNASFLEFNVDNPVLANP---- 318
              V + D+E+L  +PK+ V  TY G                F+  N   P+  NP    
Sbjct: 235 IDKVAVTDVEKLRKDPKVSV-YTYPGLRVLLLQPTFKAGPNEFITDNAGKPLEKNPLLDV 293

Query: 319 KVRHAIAQAIDRNFIRNTIYYKRVEVVNSPIPRVLSDYYDDSTFRYPFDVAAANRLLDEA 378
           +VR A++ AI+R  I + +    V   N  +P+  S  Y+       ++   A +LL EA
Sbjct: 294 RVRQALSLAINRKAIVDRVLQGTVTEANQWMPKG-SFGYNPDVKDIAYNAEQAKKLLAEA 352

Query: 379 GQPKQANGQRFSLRLSYIPGAEFKRTTDYLRSAL---ARVGI--KVEVVDGDLPTFLKHV 433
           G P     Q F + + ++PG  + +  + +++     +R+G+  KVEVV          V
Sbjct: 353 GFP-----QGFQIAI-HVPGDRYPQAPETVQAVAQFWSRIGVKTKVEVVPW-------AV 399

Query: 434 YSTRDFDININGLGRLFDPTVGVQRIYWGDGVRNPLIWI----------------NAAHY 477
           YS           GR       V  I WG+G       +                N   Y
Sbjct: 400 YS-----------GRANKNEYAVSVIAWGNGTGEAGYGLLQTLTTPDAKRGRGSNNWGRY 448

Query: 478 DNPQVDELFRQAAVELDTGKRAAQFKQIQQIVGRELPVLPL 518
            N  VD+    A VE D  +R A F+   ++V  ++  +PL
Sbjct: 449 SNESVDKALDAATVEFDAKRREAIFRHAAKLVTDDVGQIPL 489