Pairwise Alignments

Query, 542 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 533 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  162 bits (411), Expect = 2e-44
 Identities = 138/485 (28%), Positives = 225/485 (46%), Gaps = 41/485 (8%)

Query: 46  TLTVLIDPEPPTLTTIAHSAGSSVLISAKTTEGLLTY--DFDLSPQPQLATAWTVSADGL 103
           TL    +  P       +++G+    SA+T    LT         +P LAT+W +S DGL
Sbjct: 27  TLVYCSEASPAGFDPSQYTSGTDFDASAETVFNRLTQFKRGGTEVEPGLATSWDISQDGL 86

Query: 104 QYTFTLRRGVRWHDG------KPFTSADVAHSIGLL-------KQYHPRGRATFS----- 145
            YTF LR GV++H        + F + DV  +   L       +Q +P     F+     
Sbjct: 87  TYTFHLRDGVKFHTTDFFSPTRDFNADDVLFTFNRLLDAQSPFRQAYPSESPYFTDMGLN 146

Query: 146 -SVAEVRTPDAYTAVLVLSKP----VPYLLTALSASESPIVPRHLYESGKADANPANNAP 200
            ++  V   D +T    L+      V  L  + ++ +S      L + GKA+    N  P
Sbjct: 147 TTIKSVDKLDDHTVRFNLNNVDASFVQNLAMSFASVQSAEYAAQLLKQGKAEE--INQKP 204

Query: 201 IGTGPFVFKEWVRGSHVTYERNPDYWDNPKPYVDRLIVRFIPDAAARAAAIEKGEVHLSP 260
           +GTGPFVFK + + S + Y  N  YW      +D L+    PDAA+R   ++ GE  +S 
Sbjct: 205 VGTGPFVFKRYQKDSQIRYVANKQYWKPEDVKLDNLVFAITPDAASRLQKLKAGECQVS- 263

Query: 261 GTPVPLGDVERLRAKPNL-VFEPNGYQYINNVSRVEFNLENPALQDLRVRQAIAHAINRQ 319
           G P P  D+E ++  PNL V +  G+    N+  + +N+ +P L  L+VRQA+  AI++ 
Sbjct: 264 GYPRP-ADIEVMKQDPNLHVLQQAGF----NLGFLAYNVTHPPLDQLKVRQALDMAIDKP 318

Query: 320 VVQKTVWYGQGQLIPGPVHPALRKFYVPDLPVLPHDVKRAEALLDAAGFVRGKAGGNLRL 379
            + K V+   GQL    + PA +  Y P +   P+D  +A+ALL  AG   G    NL  
Sbjct: 319 AIIKAVYQSAGQLAQNALPPA-QWSYDPTIKDAPYDPTKAKALLKEAGVAPGTT-VNL-W 375

Query: 380 KLAVVPISNEGGQRTAEYLKQSLGRIGIEVTIHSQDFATYVRRVYADRAFDLHVSVMSNT 439
            + V   SN   + +A+ ++Q   ++GI+  I S ++  Y++R        +      + 
Sbjct: 376 AMTVQRASNPNARMSAQMIQQDWEKVGIKANIVSYEWGEYIKRAKNGEHDAMIYGWTGDN 435

Query: 440 FDPTVGIQRLYWSKNFKKGLPFSNGSGYSNPEVDRLLEAAAVEIDEGRRRQAFAEFQRHI 499
            DP   +  LY     K     SN + + NP  D+L++ A V  D  +R + + + Q+ +
Sbjct: 436 GDPDNWLGVLYSCAAVKG----SNYAKWCNPAYDKLVQQAKVSNDREQRIKWYQQAQKIL 491

Query: 500 VRDLP 504
              +P
Sbjct: 492 KEQVP 496