Pairwise Alignments

Query, 1160 a.a., Transcription-repair coupling factor from Variovorax sp. SCN45

Subject, 710 a.a., ATP-dependent DNA helicase RecG (EC 3.6.4.12) from Variovorax sp. SCN45

 Score =  226 bits (575), Expect = 6e-63
 Identities = 157/441 (35%), Positives = 231/441 (52%), Gaps = 20/441 (4%)

Query: 551 HKLGSGQWEKAKRKAAEQVRDSAAELLNIYARRAAREGHAFRYSPADYEVFANDFGFQET 610
           H   + Q  KA+   A+Q+    A L     R       A   + + +        F  T
Sbjct: 221 HSHPAWQRIKAEELLAQQLSQLQARLERAAQRAPVLPSPAEPLASSLHAQLLAVLPFGLT 280

Query: 611 ADQKAAIHAVVQDMISPQPMDRLVCGDVGFGKTEVALRAAFIAVTGGKQVAFLAPTTLLA 670
             Q+     + +D+    PM RL+ GDVG GKT VA  AA  A+  G Q A +APT +LA
Sbjct: 281 GAQQRVGEEITRDLCREIPMHRLLQGDVGSGKTVVAALAAARAIDAGFQCALMAPTEILA 340

Query: 671 EQHYQTLVD----RFAKWPVKVAEMSRFRSAKEITAAAKGLAEGQVDIVVGTHKLLSQSV 726
            QH+  LV       A+  ++VA ++  +  KE    +  +  G+  +V+GTH ++S+ V
Sbjct: 341 AQHFGKLVGWLDPLLAERGLRVAWLTGSQKKKERDEMSAAVESGEAALVIGTHAVISEKV 400

Query: 727 KFKNLGLLIIDEEHRFGVRHKEAMKAMRA---EVDVLTLTATPIPRTLGMALEGLRDLSV 783
           +FKNL L IIDE+HRFGV  + A++       E  +L ++ATPIPRTL M+     D+S 
Sbjct: 401 RFKNLALAIIDEQHRFGVAQRLALRGKAVGELEPHLLMMSATPIPRTLAMSYYADLDVST 460

Query: 784 IATAPQRRLAIKT-FVRNEGTGVIREAVLRELKRGGQVYF---LHNEVETIENR-----R 834
           +   P  R  I T  V +     + + +  ++ +G QVY+   L  E E ++ R     R
Sbjct: 461 LDELPPGRTPIVTKLVADHRRDEVIDRIHAQIAQGRQVYWVCPLIEESEAVDLRNATETR 520

Query: 835 QKLEEILPEA-RIAVAHGQMPERELERVMRDFVAQRYNLLLCSTIIETGIDVPTANTIVM 893
            +L   L E  ++ + H +MP  E + VM  F A    +L+ +T+IE G+DVP A+ +V+
Sbjct: 521 DELTGTLGEPIQVGLLHSRMPTAEKQAVMAAFTANEIQVLVSTTVIEVGVDVPNASLMVI 580

Query: 894 SRADKFGLAQLHQLRGRVGR-SHHQAYAYLMVPDTEGLTKQAAQRLDAIQQMEELGSGFY 952
             A++FGL+QLHQLRGRVGR +   A   L  P   G   +AA+    ++ M E G GF 
Sbjct: 581 EHAERFGLSQLHQLRGRVGRGAAASACVLLYAPGDSGRVGEAARA--RLKAMAETGDGFE 638

Query: 953 LAMHDLEIRGTGEVLGESQSG 973
           +A  DLEIRG GE LG  QSG
Sbjct: 639 IARRDLEIRGPGEFLGARQSG 659