Pairwise Alignments

Query, 593 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 456 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  191 bits (486), Expect = 4e-53
 Identities = 134/385 (34%), Positives = 199/385 (51%), Gaps = 10/385 (2%)

Query: 201 EKEALAEQLSHQIAATQRASEEKTRFLAAASHDLRQPLHAIALFGAVIEKKLKGSDEWDH 260
           ++E + ++L     A + A+  K ++LAAASHDL QPL+A  L  + + ++   S E   
Sbjct: 76  QREQVEQELRDARDAAEAANRSKDKYLAAASHDLLQPLNAARLLISTLRERNLPSVEQVL 135

Query: 261 AVRLMDAVGTLGDSLDILLDISRLDAGEVAPQVRPVELNPLFLALNNVFVAQAADLDLQL 320
             R   A+    D L  LLDISRLD   V P V    L+ LF  L + F + A    L L
Sbjct: 136 VERTHQALEGAEDLLTDLLDISRLDQAAVKPDVALYRLDELFAPLVSEFQSVALAAGLNL 195

Query: 321 RLRATPCWVLSDPQLLQRLLSNLVHNALKYTTRGGVVVAARARGPLVWIDVCDTGIGIAD 380
           R R     + +D +L+ R+L N + NA +YT  G +++ AR RG  + ++V DTG GIA 
Sbjct: 196 RARTGHYAIRTDLRLVTRILRNFLSNACRYTDDGCILLGARRRGDCLRLEVWDTGRGIAA 255

Query: 381 EHLGRIFDEFYQIDNPGRDRTKGLGIGLSIVQRLSRLLAHPLQVRSRLHHGSRFRLVLP- 439
           + L  IF EF Q+D       KG+G+GL+IV+R++ +L +P+ VRS    GS F + +P 
Sbjct: 256 DRLDAIFLEFNQLDVGRASDRKGVGLGLAIVERIAEILGYPVAVRSWPGRGSMFSIEVPI 315

Query: 440 ---AVTALGSPPLAALPGAPLPLPRRVLVIDDEAAIRQAVAGLLQAHGLSVDAVASEADA 496
                 A+   P+    G PLP  RR+LVID+E +I  ++  LL   G  V     +A A
Sbjct: 316 SEEMPLAISQLPVLPTTGNPLP-GRRLLVIDNEVSILDSMRALLAQWGCEVITATDQAGA 374

Query: 497 EAVLAHAAHGSTPVEVLLCDVRLADGADGLAAAQRLRARFGPGLQVLLITGETAPQRQRQ 556
              L     G  P E++L D  L  G  G A  + LR  F   +  ++IT +   Q +R 
Sbjct: 375 LLAL----QGRAP-ELILADYHLDHGVVGCAVVKHLREHFAQNIPAVIITADRTDQCRRV 429

Query: 557 MRDSGLQVLLKPVAADRLLQALASL 581
           +R     +L KP+   +L   L+ L
Sbjct: 430 LRRLDAPLLNKPLKPGKLRAVLSQL 454