Pairwise Alignments

Query, 593 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 1159 a.a., putative Sodium-solute symporter/sensory box histidine kinase/response regulator from Pseudomonas putida KT2440

 Score =  202 bits (514), Expect = 6e-56
 Identities = 145/389 (37%), Positives = 211/389 (54%), Gaps = 14/389 (3%)

Query: 201  EKEALAEQLSHQIAATQRASEEKTRFLAAASHDLRQPLHAIALFGAVIEKKLKG-SDEWD 259
            E   L + LS   +  +  S  KTRFLAA SHDL QPL+A  LF A + ++ +G ++E  
Sbjct: 775  ELSQLNQALSEAKSQAEAVSNSKTRFLAAVSHDLMQPLNAARLFSAALSQQAEGMNEEAR 834

Query: 260  HAVRLMDA-VGTLGDSLDILLDISRLDAGEVAPQVRPVELNPLFLALNNVFVAQAADLDL 318
              V+ MD+ + +  + +  LLDISRL+ G++ P  +P  LN LF  L   F   AA+  L
Sbjct: 835  QLVQHMDSSLRSAEELISDLLDISRLENGKITPDAKPFALNELFDTLGAEFKLLAAEKGL 894

Query: 319  QLRLRATPCWVLSDPQLLQRLLSNLVHNALKYTTRGGVVVAARARGPLVWIDVCDTGIGI 378
            + RLR +   V SD +LL+R+L N + NAL+Y  +  +++ AR +G  +W++V D G GI
Sbjct: 895  EFRLRGSRLRVDSDMKLLRRVLQNFLTNALRYG-KSPILLGARRQGERLWLEVWDRGPGI 953

Query: 379  ADEHLGRIFDEFYQIDNPGRDRTKGLGIGLSIVQRLSRLLAHPLQVRSRLHHGSRFRLVL 438
            AD+ L  IF EF ++D+      KGLG+GL+I   L R+L HPL+VRS    G+ FR+ +
Sbjct: 954  ADDKLQVIFQEFKRLDSHQTRAEKGLGLGLAIADGLCRVLGHPLEVRSWPGKGTVFRVSV 1013

Query: 439  P---AVTALGSPPLAALPGAPLPLPRRVLVIDDEAAIRQAVAGLLQAHGLSVDAVASEAD 495
            P      A  S P+    G PL    +VL +D+E +I   +  LL   G  V    ++A+
Sbjct: 1014 PIARQAAAAPSTPVEQQGGQPL-AGLQVLCVDNEDSILIGMNSLLSRWGCQVWTARNQAE 1072

Query: 496  AEAVLAHAAHGSTPVEVLLCDVRLADGADGLAAAQRLRARFGPGLQVLLITGETAPQRQR 555
             EA+L   A G  P  + L D  L DG  G      LRAR G  +  ++I+ + + +   
Sbjct: 1073 CEALL---AKGMRP-HLALVDYHLDDGETGTGLMGWLRARLGEPVPGVVISADGSKETIA 1128

Query: 556  QMRDSGLQVLLKPVAADRLLQALASLTRH 584
             +  SGL  L KPV    L    A L RH
Sbjct: 1129 LVHASGLDYLAKPVKPAAL---RALLNRH 1154