Pairwise Alignments

Query, 274 a.a., ABC-type amino acid transport/signal transduction system, periplasmic component/domain from Variovorax sp. SCN45

Subject, 267 a.a., ABC transporter, substrate binding protein (amino acid) from Agrobacterium fabrum C58

 Score =  103 bits (258), Expect = 3e-27
 Identities = 74/252 (29%), Positives = 123/252 (48%), Gaps = 17/252 (6%)

Query: 19  TGAHADA-TLDKIKQRGKLTVGVILSGPPFGTIDPATQKPVGYNVELAEGVAKGLGVGLE 77
           TG  A+A ++D I +RG + +GV++  PPFG++D A   PVGY+ ++A  + K LGV + 
Sbjct: 22  TGFSANAQSVDDIVKRGSVKIGVLVGAPPFGSVD-AQGNPVGYDADVATLIGKYLGVPVT 80

Query: 78  TVQVQPSNRVQFLQQGKVDILIANMQWTQERSEILSFVPTPFEEVGGAAIARKDSGLAKW 137
            VQ+ P +R+  L+ GKVD L+A +  T ER++ + F   P+        + KD+ + KW
Sbjct: 81  MVQLTPPSRIPALESGKVDFLVATLAPTPERAKAVMFT-NPYSAFQVGIYSHKDTKIEKW 139

Query: 138 EDLRGKPVCVSQGSNFTKPLA---EQYGAQIKAFRGQPESLLALKGGNCVAAVHVSPTLR 194
           EDL+G  V V++GS+  +      ++ G  I  F     ++ AL  G   A         
Sbjct: 140 EDLKGMTVGVNRGSSVEREFVNREKELGLTILRFDDDATTMQALFSGQVQAIAGPDAQAN 199

Query: 195 ELVTGNADW----KDYAIVSPSDLIPSPSVIWVRKGEADTQAAIDRIVQNWHRTGWLIEV 250
             +    D     K +  + P+ +        VRK   D    ++  +    + G L  +
Sbjct: 200 AAIKLRGDTTTEVKFFFSIQPNSMT-------VRKDAVDLHQWLNNTIYYIKQNGELDAI 252

Query: 251 EKKNGMTPTPLL 262
            +K   TP P+L
Sbjct: 253 ARKWVGTPLPVL 264