Pairwise Alignments

Query, 267 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 219 a.a., L-cystine transport system permease protein YecS from Xanthobacter sp. DMC5

 Score =  109 bits (273), Expect = 4e-29
 Identities = 68/215 (31%), Positives = 111/215 (51%), Gaps = 11/215 (5%)

Query: 50  WQWTPALLWGLFTNIKISVLAMALGTVAGLVVGALSLSPLRFLRVVTRWYVQFFRNAPVL 109
           W     LL      + +S+LA   G V GLVV    ++   +L+     Y++ F+  P+L
Sbjct: 7   WDIVSNLLLAARWTVLLSILAFIGGGVVGLVVLYCRIARKVWLQRAANLYIELFQGTPLL 66

Query: 110 VLIYFTTYVFPFE-LHLVKWTVPFPDWIKVVLGLALPTSAVVAEIFRGAIQSIPSAQWEA 168
           + ++   +  P   L +  W   F       + L L TSA +AEI+RG ++SIP  QWEA
Sbjct: 67  MQLFLIFFGLPLMGLDVSPWAAAF-------VSLTLWTSAFLAEIWRGCVESIPKGQWEA 119

Query: 169 AQSLAFRRSEIFRLIVLPQCLRRMLPPWMNLYASITMSTALASLVGAHDVVDTAQIASNT 228
           + SLA    E  R +VLPQ LR  +PP +     +   TAL S++G  ++   + I +N 
Sbjct: 120 SSSLAMSFFEQLRYVVLPQALRIAVPPTVGFSVQVVKGTALTSIIGFVELSKASTIITNA 179

Query: 229 VARTDFTVLVYFTLLGVFFAYCYPIARATRALERR 263
                FTV  +  L  ++F  C+P++++++ LER+
Sbjct: 180 TFE-PFTVYGFAAL--IYFVLCWPLSKSSQLLERK 211