Pairwise Alignments

Query, 267 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 222 a.a., cystine ABC transporter permease from Escherichia coli ECRC62

 Score = 94.0 bits (232), Expect = 2e-24
 Identities = 59/191 (30%), Positives = 98/191 (51%), Gaps = 9/191 (4%)

Query: 54  PALLWGLFTNIKISVLAMALGTVAGLVVGALSLSPLRFLRVVTRWYVQFFRNAPVLVLIY 113
           P LL G    +++S+  M  G + G ++  + LSP+  +R + R+Y+  FR  P++  ++
Sbjct: 13  PFLLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLF 72

Query: 114 FTTYVFP-FELHLVKWTVPFPDWIKVVLGLALPTSAVVAEIFRGAIQSIPSAQWEAAQSL 172
              Y  P F + L     P P     ++GL+L T+A  AE  R AI SI   QWEAA S+
Sbjct: 73  MIYYGLPQFGIELD----PIPS---AMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASI 125

Query: 173 AFRRSEIFRLIVLPQCLRRMLPPWMNLYASITMSTALASLVGAHDVVDTAQIASNTVART 232
                +  R  +LPQ  R  LPP  N + S+   T+LA+ +   ++   AQ+ ++     
Sbjct: 126 GMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEV 185

Query: 233 DFTVLVYFTLL 243
            FT+ +  +L+
Sbjct: 186 -FTMYLAASLI 195