Pairwise Alignments

Query, 287 a.a., ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 260 a.a., ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  227 bits (579), Expect = 2e-64
 Identities = 126/256 (49%), Positives = 162/256 (63%), Gaps = 3/256 (1%)

Query: 5   DNATDNAANPAPFPLVALRGVQLAFGDNAVLRGIDLDVQRGQAVSIIGPSGSGKSTILRC 64
           D    NA   A   ++ + GVQ  +GD  VLR IDL+VQRG+ + I GPSGSGKST+LRC
Sbjct: 7   DTPASNADGRAEL-VIRMVGVQKWYGDFQVLRDIDLEVQRGERIVICGPSGSGKSTLLRC 65

Query: 65  ITGLLRPQQGEIRVGDTRVDTLRTEAELIALRKRVGFVFQQYNLFPHLTVLQNLVIAPTR 124
           I  L   QQG+I V   R +       + A+R+ VG VFQ +NLFPHLT+L+N  +AP  
Sbjct: 66  INRLEEHQQGQIVVN--RAELTADMRRIDAVRRDVGMVFQHFNLFPHLTILENCTLAPVW 123

Query: 125 VAGRDRATAERDARALLDKVRLSHKETAYPGELSGGQQQRVAIARALAMRPELMLFDEVT 184
                   A+  A + L++VR+  +   YP +LSGGQQQRVAIARAL M P++MLFDE T
Sbjct: 124 SKKYSPKEAKEVAMSYLERVRIPEQANKYPSQLSGGQQQRVAIARALCMGPKVMLFDEPT 183

Query: 185 SALDPETVGEVLTVIRDLVRDGLTCVLVTHEMRFAEEISDTVYFTEAGVIVEHGPAARIF 244
           SALDPE V EVL  +  L  DG+T + VTHEM FA ++++ V F + G IVE  P    F
Sbjct: 184 SALDPEMVKEVLDTMVSLADDGMTMLSVTHEMNFARQVANRVIFMDRGAIVEQAPPQEFF 243

Query: 245 GAPESERTRAFLHRAL 260
           G P+ ERTR FL + L
Sbjct: 244 GNPKHERTRLFLSQLL 259