Pairwise Alignments

Query, 533 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 535 a.a., Oligopeptide-binding protein AppA from Xanthobacter sp. DMC5

 Score =  424 bits (1089), Expect = e-123
 Identities = 225/522 (43%), Positives = 307/522 (58%), Gaps = 5/522 (0%)

Query: 12  SALLAALLAAGLAAHAAP----PSHSGTLTLLSTSEPTALVTIGNVATPILSVSAKVTEG 67
           +A    LL A + A   P    P   GTL  +   EPT L T  N      +VS  + +G
Sbjct: 12  AAAFIGLLPAAVLAQTVPSEGTPKRGGTLVTIIQPEPTVLTTTVNNQFSNGAVSVNIYDG 71

Query: 68  LLKYDYDVNPQPQLATKWVISPDGLTYTFTLRQGVKWHDGKDFTSADVAYS-IELLKKIH 126
           L+ YD ++  +P LA  W ISPD LT TF LR GVKWHDG  FTSADV +S +E+ KK+H
Sbjct: 72  LVAYDDNLGLKPALAESWEISPDKLTITFHLRHGVKWHDGAPFTSADVRFSALEIWKKVH 131

Query: 127 PRGRNTFANLTAIDTPDKYTAILRLSKPAPYLIRALVATETPIVPKHIYEGTDPANNPNN 186
            RGR TFA L  ++TPD YTAI R   P+  ++ AL A E  ++PKH+YE TD   NP+N
Sbjct: 132 SRGRLTFAELEDVETPDAYTAIFRFRAPSLVVLSALNAWEGQVLPKHLYENTDILKNPHN 191

Query: 187 NAPIGTGPFKFKEWVRGSHIVYERNNDYWDKPKPFVDQLIVRFVTDPAAAAVAFETGTVD 246
             P+GTGPFKFK W +G  I   RN DYWD  KP++D++I RF+ D  A A A E G V 
Sbjct: 192 VEPVGTGPFKFKSWTKGEAIELVRNADYWDAGKPYLDRVIYRFIPDGGARAAAIEIGDVG 251

Query: 247 LGYRTPVPLADLERLKKVPALRFETKGNSYSSNVTRLEFNLDNEYFKNEKVRQAVAHAID 306
                PVP AD+ER++K+P L+ E++G  +++    LEFNL N    + +VR+A AHAID
Sbjct: 252 YAAFDPVPFADIERVRKLPNLKVESRGYEWNAKYYFLEFNLRNPILADIRVRRAFAHAID 311

Query: 307 RNVIVKVVNYGYGQVSYSPIAPGLKAFHDPAPSPYAFDVKKANALLDEAGFPKKAGGVRF 366
           R  +   V +G    +  PI    KAF+      YAFD K+A  LLDEAG+ + A GVRF
Sbjct: 312 RQGLADTVWFGLVAPATGPIPSFTKAFYTADVPTYAFDPKEAERLLDEAGYKRGANGVRF 371

Query: 367 SVPLDFNPIGADGPRLADYLRSALARIGIAVTVRAQDPSAFIKRIYTDRDFAFTHNGASN 426
           S+  DF P   +  + A+Y+R  L R+G+ V VR+QD  AF++R+Y   DF       S 
Sbjct: 372 SINQDFQPFNENFRKTAEYIRQNLKRVGVEVNVRSQDLGAFVRRVYGSYDFDINTGQFSV 431

Query: 427 LFDPTVGVQRLYWSKNFIKGVPFSNGTHYQNPVVDKLLEDAAVENDPGKRLKLFKDFQDT 486
             DP +G+ R +WSK+   G+P++N + Y +P  DK++E      DP +R+ LF + Q  
Sbjct: 432 FIDPELGLLRQFWSKSIAPGIPWTNASGYADPGTDKVIEGIKSAADPEQRVALFHELQRR 491

Query: 487 VARDVPDLNLYQPVFITIANQRVHDHSLTADGVESNLADVWV 528
           V RD+P L L +    T+ N  V   S+  DG  S+L D+W+
Sbjct: 492 VQRDLPVLPLLELKQFTVYNTNVRGVSVRPDGAMSSLKDIWL 533