Pairwise Alignments

Query, 533 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 530 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score =  142 bits (357), Expect = 4e-38
 Identities = 140/530 (26%), Positives = 227/530 (42%), Gaps = 61/530 (11%)

Query: 11  RSALLAALLAAGLAAHAAPPSHSGTLTLLSTSEP--------TALVTIGNVATPILSVSA 62
           R AL A  LAA  AA A       TL   S   P        T+  ++   A PI +   
Sbjct: 7   RVALAALTLAAAQAACA------NTLVYCSEGSPENFNPQLYTSGTSVDASAVPIYNRLV 60

Query: 63  KVTEGLLKYDYDVNPQPQLATKWVISPDGLTYTFTLRQGVKWH------DGKDFTSADVA 116
               G  +        P LA +W ISPDG  YTF LR+GVK+H        +DF + DV 
Sbjct: 61  DFKVGTTEL------VPSLAERWDISPDGTQYTFHLRKGVKFHRNAQFTPSRDFNADDVI 114

Query: 117 YSIELLKKI----HPRGRNTFAN---------LTAIDTPDKYTAILRLSKPAPYLIRALV 163
           +S +  + +    H     T+AN         +TAID  D Y     LS      +  L 
Sbjct: 115 FSFQRQRDLNHPYHKVSGGTYANFESLSFRSLITAIDRVDDYRVRFTLSHAEAPFLADLA 174

Query: 164 ATETPIVPKHIYEGTDPANNPN--NNAPIGTGPFKFKEWVRGSHIVYERNNDYWDKPKPF 221
                ++     +    A  P   +  PIGTGPF+  ++ + S I+Y+   DYW + K  
Sbjct: 175 WYFASVLSAEYADQMLKAGAPEKVDLEPIGTGPFQLAQYQKDSRILYQAFPDYW-QGKAK 233

Query: 222 VDQLIVRFVTDPAAAAVAFETGTVD-LGYRTPVPLADLERLKKVPALRFETKGNSYSSNV 280
           +D+L+     D +             + +  P  LAD++  K +  ++          N+
Sbjct: 234 LDRLVFSITPDASVRYAKLRKNECQVMPFPNPAELADIKSNKDITLMQ------KAGLNI 287

Query: 281 TRLEFNLDNEYFKNEKVRQAVAHAIDRNVIVKVVNYGYGQVSYSPIAPGL-KAFHDPAPS 339
             L FN       N KVRQA+  AI++  I++ V  G G  + + + PG+  A  D    
Sbjct: 288 GFLAFNTRKAPLDNLKVRQALTMAINKPAIIEAVFQGTGSAAKNLLPPGVWSAAAD--LK 345

Query: 340 PYAFDVKKANALLDEAGFPKKAGGVRFSVPLDFNPIGADGPRLADYLRSALARIGIAVTV 399
            Y +D  KA ALL +AG  +      +++P+   P   +  R+A+ +++  A++G+   +
Sbjct: 346 DYEYDPGKARALLKDAGLAEGTTIDLWAMPVQ-RPYNPNARRMAEMIQADWAKVGVNANI 404

Query: 400 RAQDPSAFIKRIYTDRDFAFTHNGASNLFDPTVGVQRLYWSKNFIKGVPFSNGTHYQNPV 459
            + +   ++KR+ +    A      +   DP      L+   +   G   SN + +  P 
Sbjct: 405 VSYEWGEYLKRVRSGEHQAALMGWTTATGDPDNFFGPLFTCTSANGG---SNSSKWCYPP 461

Query: 460 VDKLLEDAAVENDPGKRLKLFKDFQDTVARDVPDL-----NLYQPVFITI 504
            DKL+ DA  E D  KR++L++  Q  +    P +      L++PV  T+
Sbjct: 462 FDKLITDARAEQDHQKRVELYRQAQFMMHEQAPAVMIAHSTLFEPVRNTV 511