Pairwise Alignments

Query, 533 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 504 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score =  149 bits (376), Expect = 2e-40
 Identities = 135/503 (26%), Positives = 222/503 (44%), Gaps = 32/503 (6%)

Query: 13  ALLAALLAAGLAAHAAPPSHSGTLTLLSTSEPTALVTIGNVATPILSVSAKVTEGLLKYD 72
           A    LLA  L +  A  +  G LT+    + T    I +       V + V + L++ D
Sbjct: 9   AAAGVLLALSLVSELAQAA--GILTIGRREDSTTFDPIKSAQNADNWVFSNVFDVLIRVD 66

Query: 73  YD-VNPQPQLATKWVISPDGLTYTFTLRQGVKWHDGKDFTSADVAYSIELLKKIHPR-GR 130
                 +P LA  W +SPDG  YTFTLR+  ++ DG   T+ D  +S+  ++       R
Sbjct: 67  KTGTTLEPGLAQHWTVSPDGKVYTFTLREA-RFSDGSPVTAQDAVFSLSRIRDSKESLWR 125

Query: 131 NTFANLTAIDTPDKYTAILRLSKPAPYLIRALVATETPIVPKHIYEGTDPANNPNNNAPI 190
           ++++ +  +  PD +T ++ L  P+   +  L      ++P++I              P+
Sbjct: 126 DSYSIIDTLAAPDAHTLVVTLKSPSAPFLSQLALPNASVLPENIVHRLGEETFAEK--PV 183

Query: 191 GTGPFKFKEWVRGSHIVYERNNDYWDKPKPFVDQLIVRFVTDPAAAAVAFETGTVDLGYR 250
           G+G F  + W RG  IV  +N  YW      +D +  + + D     +  + G +D    
Sbjct: 184 GSGAFVIQSWARGDKIVLTKNPYYWQADHVSLDGVEWQTIPDDNTRMLKVQAGELDAA-- 241

Query: 251 TPVPLADLERLKKVPALRFETKGNSYSSNVTRLEFNLDNEYFKNEKVRQAVAHAIDRNVI 310
             VP + L  L+K P L+        S+    L  N  +      +VRQA+ +AID++ I
Sbjct: 242 LSVPFSRLASLQKDPNLKVT---QDPSTREDHLLINHAHGLLGKVEVRQALDYAIDKSAI 298

Query: 311 VKVVNYGYGQVSYSPIAPGLKAFH-DPAPSPYAFDVKKANALLDEAGFPKKAGGVRFSVP 369
           VK V + YG V+ S +  G   F+ D    PY  D +KA  +L  AG    A G+  +  
Sbjct: 299 VKTVTFNYGTVANSYLPKGALYFYADNLQRPY--DPEKAKQMLKAAG----ASGLTLNYV 352

Query: 370 LDFNPIGADGPRLADYLRSALARIGIAVTVRAQDPSAFIKRIYTDRDFAFTHNGASN-LF 428
           +  N       ++A  L+  LA+ G+AV ++  DPS     +    DF  + N  +N + 
Sbjct: 353 V--NAGDEVDEQIAVLLQQQLAKAGVAVNLQKVDPSQNWSMLVAG-DFDLSVNYWTNDIL 409

Query: 429 DPTVGVQRLYWSKNFIKGVPFSNG--THYQNPVVDKLLEDAAVENDPGKRLKLFKDFQDT 486
           DP            F+ G   +    T YQN  V  L+  A VE DP KR +++ D Q  
Sbjct: 410 DPD-------QKTTFVLGHDSNMNYMTRYQNDKVKALVAAARVEMDPKKREQMYIDLQKM 462

Query: 487 VARDVPDLNLYQPVFITIANQRV 509
              DV  ++LY   +  +  + +
Sbjct: 463 AKDDVNWIDLYYSPYRNVTRKNI 485