Pairwise Alignments

Query, 533 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 519 a.a., ABC transporter substrate-binding protein from Dickeya dadantii 3937

 Score =  140 bits (353), Expect = 1e-37
 Identities = 121/489 (24%), Positives = 224/489 (45%), Gaps = 30/489 (6%)

Query: 12  SALLAALLAAGLAAHAAPPSHSGTLTL-LSTSEPTALVTIGNVATPILSVSAKVTEGLLK 70
           +A++ +L  +G AA     +  G L + +++ +P  +  +       L++   +   L  
Sbjct: 11  AAMMLSLGVSGQAAAETTANAGGNLIIGITSGDPLVMNPLYASDRTTLTIMQALYSPLYS 70

Query: 71  YDYDVNPQPQLATKWVISPDGLTYTFTLRQGVKWHDGKDFTSADVAYSIELL--KKIHPR 128
           Y+ +   +  LA     S D  +YT  L+ G+KW DG+  T+ DV ++   L  +  H  
Sbjct: 71  YN-EGKVEWGLAESLTPSADNRSYTLKLKPGLKWQDGQAITADDVVFTFNKLLDENQHSF 129

Query: 129 GRNTFA---NLTAIDTPDKYTAILRLSKPAPYLIRALVATETPIVPKHIYEG-TDPANNP 184
            R+ F       A+   D  T    L + +     +LV      +P+H++    D + + 
Sbjct: 130 FRSMFVYNNQPVAVSKVDDLTVKFTLPQVSAAFAGSLVQIYP--IPQHVFANEADLSKSA 187

Query: 185 NNNAPIGTGPFKFKEWVRGSHIVYERNNDYWDKPKPFVDQLIVRFVTDPAAAAVAFETGT 244
            N+AP+G+GPFKF E+  G +    R +DYW+  KP +  +  RF  D  AA +A + G 
Sbjct: 188 KNDAPVGSGPFKFGEYRSGQYYALSRFDDYWNG-KPKLGAVTYRFARDANAARLAMQNGE 246

Query: 245 VDLGYRTPVPLADLERLKKVPALRFETKGNSYSSNVTRLEFNLDNEYFKNEKVRQAVAHA 304
           ++L    P  +  L+   +   + +     +Y      + FN + +  KN+ +RQA+A+A
Sbjct: 247 INLKLIDPQDVRPLKATSRFDFIIYPEGRLAY------MVFNQNVDSMKNKALRQAIAYA 300

Query: 305 IDRNVIVKVV--NYGYGQVSYSPIAPGLKAFHDPAPSPYAFDVKKANALLDEAGFPKKAG 362
           I+++ +V+    +  Y + + S + P    +       Y +++ KA AL  E+G P+   
Sbjct: 301 INKDELVQTAFTSLDYAKPANSILTPDT-LYQTGDVEAYPYNLDKAKALFQESGQPQG-- 357

Query: 363 GVRFSVPLDFNPIGADGPRLADYLRSALARIGIAVTVRAQDPSAFIKRIYTDRDFAFTHN 422
                + L +         +  Y++  L  IGI V +   D +A  ++     + A+   
Sbjct: 358 ---LKLRLAYINANKTQESMGLYIQQQLKGIGINVELLPLDANAMSQKGRDKNNTAYE-- 412

Query: 423 GASNLFDPTVGVQRLYWSKNFIKGVPFSNGTHYQNPVVDKLLEDAAVENDPGKRLKLFKD 482
              +L    +G +   +   F+    + N  HY+NP  D L +  AVE D G+R  ++KD
Sbjct: 413 --LSLGGYIMGAEPDGYKSLFMSNEDY-NYAHYKNPAFDALWDKGAVETDAGRRAAIYKD 469

Query: 483 FQDTVARDV 491
            Q TVA ++
Sbjct: 470 IQQTVASEM 478