Pairwise Alignments

Query, 229 a.a., Glutamate/aspartate ABC transporter, permease protein GltK (TC 3.A.1.3.4) from Variovorax sp. SCN45

Subject, 319 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  116 bits (290), Expect = 6e-31
 Identities = 80/222 (36%), Positives = 118/222 (53%), Gaps = 11/222 (4%)

Query: 6   DWASLQRAWPY--LLQGLQMTAFLVAASMAAGMGLGTLLAITRIFAPRPVAALVAGYVNL 63
           D   + R W    L+ GL  T +L   S   G+ +G    + R+ +   +  L   YV L
Sbjct: 104 DVVGVTRHWALGPLMWGLWTTLWLSVVSGILGLIIGLATGLCRLSSNPTLRDLSTIYVEL 163

Query: 64  FRSIPLILTILWIYFLMPVVLRSVTGDPNLSVGPIYAALVAFVLAESAYYCEIIRAGIGS 123
            R  PL++ I   YF +  VL       NLS    +A + A  L   AY  EI+RAG+ S
Sbjct: 164 VRGTPLLVQIFIFYFFIGTVL-------NLSRE--FAGIAALSLFTGAYVAEIVRAGVQS 214

Query: 124 VRAGQMQAAQSLGMSPWQAMRHVILPQAFRNMTPSLINQTIALLKDTSLVYVISLNDFLG 183
           +  GQ +AA+SLG+S  Q+MRHV+LPQAF+ + P L  Q I+L+KDTSLV VI++ + L 
Sbjct: 215 ITRGQNEAARSLGLSASQSMRHVVLPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELLK 274

Query: 184 AASKVGQRDGRVVEVYILVAVVYLVLCTAGAWWITWLQRRKA 225
           +  +V        E+   VA +YL++    +   + L+RR A
Sbjct: 275 SGREVITTSFSPFEILFCVAGLYLLINLPLSKMASRLERRLA 316