Pairwise Alignments

Query, 308 a.a., Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) from Variovorax sp. SCN45

Subject, 306 a.a., glutamate / aspartate ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score =  259 bits (662), Expect = 6e-74
 Identities = 145/301 (48%), Positives = 190/301 (63%), Gaps = 7/301 (2%)

Query: 11  LIRPFLAIAGLALCAGVAAQSA--PPLEGTLKKIKDTGTITVATRGASIPFNYLDDNNKQ 68
           ++R    + G A+ A V A  A    L GTLKKIK++GTIT+  R +SIPF+YL    + 
Sbjct: 1   MMRIVRQLLGAAIAAAVIASPAMAEELTGTLKKIKESGTITLGHRDSSIPFSYLAGKPEP 60

Query: 69  AGFAWEIAQRVVDQAKKDLKLAKLEVKTLEVTPQTRIPLVANQTVDLECSSTTNNAERQN 128
            G++ +I   VVD  KK L    ++V+   VT QTRIPLV N TVDLEC STTNN ERQ 
Sbjct: 61  VGYSHDIQLAVVDALKKQLG-TDIKVRYNLVTSQTRIPLVQNGTVDLECGSTTNNVERQQ 119

Query: 129 QVSFSTTFFVVGARLLVRKNSG---IKHWSDLVGKNVVVSAGTTAERMLRQLNEKNKWGI 185
           QV FS   F VG RLL +   G    K + DL GKNVV +AGTT+ER+L+ +N   +  +
Sbjct: 120 QVGFSVGIFEVGTRLLTKVKDGQPAYKDFPDLAGKNVVTTAGTTSERILKAMNADKQMKM 179

Query: 186 NIILAKDINENFLTVETGRAVAATQDDIILFSNIARARNPADWEVVGVPQQKEAYGCMLR 245
           N+I AKD  E F  +E+GRAVA   DD +L   +A+AR PADW + G PQ  E YGCM+R
Sbjct: 180 NVISAKDHGEAFNMLESGRAVAFMMDDALLAGEMAKARKPADWVITGTPQSYEIYGCMVR 239

Query: 246 KGDVAFKKLVDGVITGMMRSGEFASLYEKYFLKPIAVKGSVAVNFPMSPDMQELLRHPND 305
           K D AFKK VD  I    +SGE    YEK+F++PI  KG + +NF MS ++++L+  P D
Sbjct: 240 KDDAAFKKAVDDAIVAYFKSGEVNKSYEKWFMQPIPPKG-LNLNFQMSEELKKLIAEPTD 298

Query: 306 Q 306
           +
Sbjct: 299 K 299