Pairwise Alignments
Query, 1054 a.a., Copper/silver efflux RND transporter, transmembrane protein CusA from Variovorax sp. SCN45
Subject, 1048 a.a., cation efflux system protein from Pseudomonas putida KT2440
Score = 649 bits (1674), Expect = 0.0
Identities = 380/1050 (36%), Positives = 600/1050 (57%), Gaps = 32/1050 (3%)
Query: 1 MIAKLIRWSIANRFLVLLATAMLSAWGVYSVLRTPLDALPDLSDVQVIIRTSYPGQAPRI 60
M +LI+++I R +V+LA +++A G++S + P+DA+PD+++VQV I T+ PG +P
Sbjct: 1 MFERLIQFAIEQRLVVMLAVVLMAAVGIHSYQKLPIDAVPDITNVQVQINTAAPGYSPLE 60
Query: 61 VENQITYPLTTTMLSVPGAKTVRGYSFFGDSFVYVLFEDGTDLYWARSRVLEYLNQVQSR 120
E +IT+ + T M +PG K R S G S V V+F+DGTD+++AR V E L + +
Sbjct: 61 TEQRITFAIETAMAGLPGLKQTRSLSRSGLSQVTVIFDDGTDIFFARQLVNERLQVAREQ 120
Query: 121 LPAAAKASLGPDATGVGWIYQY-------ALVDRGGTQDASQLRALQDWFLKYELKTVPN 173
LP +A +GP +TG+G I+ + AL + G + LR +QDW +K +L+ VP
Sbjct: 121 LPEGIEAGMGPISTGLGEIFLWTVEAQEGALKEDGTPYTPTDLRVIQDWIIKPQLRNVPG 180
Query: 174 VAEVASIGGMVRQYQVVLDPEKLAAYRIPHTKAVEAIQKANQETGGSVLELGEAEYMVRA 233
VAEV SIGG +QY + +P++LAAY++ + A+++ N G +E + ++RA
Sbjct: 181 VAEVNSIGGHAKQYLIAPEPKRLAAYKLTLNDLIAALERNNANIGAGYIERNGEQLLIRA 240
Query: 234 SGYLQGLEDFRKIPLMTTDAGVSVRLGDVARIQVGPEMRRGIGELDGEGEAVGGVIVMRS 293
G + ED I + + D G +R+ VA++ +G E+R G +G E V G + M
Sbjct: 241 PGQVASAEDIANIVISSVD-GTPIRVSHVAQVGLGEELRSGAATENGR-EVVLGTVFMLI 298
Query: 294 GKNALETITAVKEKLQTLQASLPKGVEIVPTYDRSNLIERAVRNLGFKLLEEFIVVAVVC 353
G+N+ AV KL + +LPKGV V YDR+NL+E+A+ + L+E I+V V
Sbjct: 299 GENSRTVSQAVAAKLVEINRNLPKGVVAVTVYDRTNLVEKAIATVKKNLIEGAILVIAVL 358
Query: 354 FIFLFHLRSAFVAIVSLPIGILAAFIVMRYQGVNANIMSLGGIAIAIGAMVDAAVVMIEN 413
F+FL ++R+A + + +P+ +L F M V+AN+MSLG A+ G +VD AVV++EN
Sbjct: 359 FLFLGNIRAALITAMVIPLSMLFTFTGMFSNKVSANLMSLG--ALDFGIIVDGAVVIVEN 416
Query: 414 AHKHIEKWKHDHPDQTLRGETHWRVIADSAAEVGPALFFSLLIITLSFIPVFTLEAQEGR 473
A + + + H RGE V A +A E L + LII + ++P+F L EG+
Sbjct: 417 AIRRLAHAQQRHGRMLTRGERFHEVFA-AAREARRPLIYGQLIIMVVYLPIFALTGVEGK 475
Query: 474 MFSPLAFTKTYAMAAAAGLSVTLIPVLMGYLIRGRIPDEKTNPLNRLLIAVYQPLLNAVL 533
MF P+AFT A+ A LSVT +P + + G++ +E+ + R Y P+L VL
Sbjct: 476 MFHPMAFTVVMALLGAMILSVTFVPAAIALFVTGKVKEEE-GLVMRTARQRYAPVLAWVL 534
Query: 534 RWPKLTLAGAAVVLVLSLWPLQHIGGEFMPRLDEGDLLYMPSALPGLSTGKAGELLQQTD 593
KL A AA +++LS +G EF+P L EGD +PG S ++ ++ Q+ +
Sbjct: 535 GRRKLACAAAAALVLLSGVMASRMGSEFIPSLSEGDFALQALRVPGTSLSQSVDMQQRLE 594
Query: 594 R-LIKTVPEVASVYGKAGRAESATDPAPIEMFETTIQFKPREQW-RAGMTQDKLVEELDR 651
+ +I VPEV V+ + G AE A+DP P + + + +PREQW G +D+L+ ++ R
Sbjct: 595 QAIIAQVPEVERVFARTGTAEIASDPMPPNISDAYVMLRPREQWVDPGKPRDELIAQVQR 654
Query: 652 IV-KVPGLTNIWVPPIRNRIDMLATGIKSPVGVKVAGTDLATIDRITGEIERVLKDVPGV 710
VPG PI+ R + L +G++S V VK+ G D+ ++R +I L+ VPG
Sbjct: 655 AAASVPGSNYELSQPIQLRFNELISGVRSDVAVKLFGDDMEVLNRTAAQIAASLQGVPGA 714
Query: 711 SSALAERLTGGRYVDVNIKRDEASRFGMNIADVQSVIASAVGGENIGETVEGLQRFPINV 770
S E+ TG + ++I RD+A+R G+N+ DVQ IA AVGG G EG +RF + V
Sbjct: 715 SEVKVEQTTGLPVLTIDIDRDKAARHGLNVGDVQDAIAIAVGGRTAGTLYEGDRRFDMVV 774
Query: 771 RYPREIRDSLEQLRSLPI-----VTERGARL---VLSDVADIRITDGPPMLRSENARLSG 822
R +R ++ L SL I ER ++ LS VA + + GP + E+ +
Sbjct: 775 RLSETLRTDVDGLASLLIPVPASAAERAGQIGFIPLSQVATLNLQLGPNQVSREDGKRVV 834
Query: 823 WVYVDIRGRDLRSAVQDMQRVVTKEVKLPPGYAVSWSGQFEFLERATAKLKVVVPFTLLI 882
V ++RGRDL S VQ+ ++ + +V++PPGY W GQFE L+ A +L+VVVP LL+
Sbjct: 835 VVSANVRGRDLGSFVQEAEQALIDQVQVPPGYWTRWGGQFEQLQSAAERLQVVVPVALLL 894
Query: 883 IFVLLYLTFKRFDEALLIMAALPFALVGGIWLLYLLSYNLSVAGAVGFIALAGVSAEFGV 942
+ LL + F + LL+ +PFAL GG+ L+ LS++ VGFIAL+GV+ G+
Sbjct: 895 VMALLLMMFNNLRDGLLVFTGIPFALTGGVLALWARDIPLSISAGVGFIALSGVAVLNGL 954
Query: 943 IMLLYLKHAWDERVDEGKTSTADLLDAIREGAVLRVRPKAMTVAVILAGLFPIMWGTGTG 1002
+M+ +++ +EG+T A A+ EGA+ R+RP MT V G P+ TGTG
Sbjct: 955 VMIAFIRGL----REEGRTLRA----AVEEGALTRLRPVLMTALVASLGFIPMALATGTG 1006
Query: 1003 SEVMQRIAAPMVGGMITAPLLSMFVIPAAY 1032
+EV + +A ++GG++++ L++ V+PA Y
Sbjct: 1007 AEVQRPLATVVIGGILSSTALTLLVLPALY 1036
Score = 44.7 bits (104), Expect = 4e-08
Identities = 95/402 (23%), Positives = 167/402 (41%), Gaps = 47/402 (11%)
Query: 682 GVKVAGTDLATIDRITGEIERVLKDVPGVSSALAERLTGGRYVDVNIKRDEASRFGMNIA 741
G TDL I I+ L++VPGV AE + G + + E R
Sbjct: 155 GTPYTPTDLRVIQDWI--IKPQLRNVPGV----AEVNSIGGHAKQYLIAPEPKRLAAYKL 208
Query: 742 DVQSVIASAV-GGENIGETVEGLQRFPINVRYPREIRDSLEQLRSLPIVTERGARLVLSD 800
+ +IA+ NIG + +R P ++ S E + ++ I + G + +S
Sbjct: 209 TLNDLIAALERNNANIGAGYIERNGEQLLIRAPGQVA-SAEDIANIVISSVDGTPIRVSH 267
Query: 801 VADIRITDGPPMLRS----ENAR--LSGWVYVDIRGRDLRSAVQDMQ-RVVTKEVKLPPG 853
VA + + + LRS EN R + G V++ I G + R+ Q + ++V LP G
Sbjct: 268 VAQVGLGEE---LRSGAATENGREVVLGTVFMLI-GENSRTVSQAVAAKLVEINRNLPKG 323
Query: 854 Y-AVSWSGQFEFLERATAKLKVVVPFTLLIIFVLLYLTFKRFDEALLIMAALPFALVGGI 912
AV+ + +E+A A +K + +++ +L+L AL+ +P +++
Sbjct: 324 VVAVTVYDRTNLVEKAIATVKKNLIEGAILVIAVLFLFLGNIRAALITAMVIPLSMLFTF 383
Query: 913 WLLYL--LSYNLSVAGAVGFIAL---AGVSAEFGVIMLLYLKHAWDERVDEGKTSTADLL 967
++ +S NL GA+ F + A V E + L + + + G+ ++
Sbjct: 384 TGMFSNKVSANLMSLGALDFGIIVDGAVVIVENAIRRLAHAQQRHGRMLTRGERFH-EVF 442
Query: 968 DAIREGAVLRVRPKAMTVAVILAGLFPIMWGTGTGSEVMQRIAAPMVGGMITAPLLSMFV 1027
A RE RP +I+ PI TG ++ +A +V ++ A +LS+
Sbjct: 443 AAAREAR----RPLIYGQLIIMVVYLPIFALTGVEGKMFHPMAFTVVMALLGAMILSVTF 498
Query: 1028 IPAAY-------------LLMRRPRK----ASRWTLGRSRRA 1052
+PAA L+MR R+ W LGR + A
Sbjct: 499 VPAAIALFVTGKVKEEEGLVMRTARQRYAPVLAWVLGRRKLA 540
Score = 29.3 bits (64), Expect = 0.002
Identities = 62/334 (18%), Positives = 124/334 (37%), Gaps = 42/334 (12%)
Query: 191 LDPEKLAAYRIPHTKAVEAIQKA-NQETGGSVLELGEAEY--MVRASGYLQGLEDFRKIP 247
+D +K A + + +AI A T G++ E G+ + +VR S L+ D
Sbjct: 732 IDRDKAARHGLNVGDVQDAIAIAVGGRTAGTLYE-GDRRFDMVVRLSETLRTDVDGLASL 790
Query: 248 LMTTDAGVSVRLGDVA----------RIQVGPEMRRGIGELDGEGEAVGGVIVMRSGKNA 297
L+ A + R G + +Q+GP + DG+ V+V+ +
Sbjct: 791 LIPVPASAAERAGQIGFIPLSQVATLNLQLGPNQ---VSREDGKR-----VVVVSANVRG 842
Query: 298 LETITAVKEKLQTLQASLPKGVEIVPTY-----DRSNLIERAVRNLGFKLLEEFIVVAVV 352
+ + V+E Q L V++ P Y + ++ A L + ++V +
Sbjct: 843 RDLGSFVQEAEQALIDQ----VQVPPGYWTRWGGQFEQLQSAAERLQVVVPVALLLVMAL 898
Query: 353 CFIFLFHLRSAFVAIVSLPIGILAAFIVMRYQGVNANIMSLGGIAIAIGAMVDAAVVMIE 412
+ +LR + +P + + + + + +I + G G V +VMI
Sbjct: 899 LLMMFNNLRDGLLVFTGIPFALTGGVLALWARDIPLSISAGVGFIALSGVAVLNGLVMIA 958
Query: 413 NAHKHIEKWKHDHPDQTLRGETHWRVIADSAAEVGPALFFSLLIITLSFIPVFTLEAQEG 472
E+ G T + + A + + L+ +L FIP+
Sbjct: 959 FIRGLREE-----------GRTLRAAVEEGALTRLRPVLMTALVASLGFIPMALATGTGA 1007
Query: 473 RMFSPLAFTKTYAMAAAAGLSVTLIPVLMGYLIR 506
+ PLA + ++ L++ ++P L + R
Sbjct: 1008 EVQRPLATVVIGGILSSTALTLLVLPALYQWAYR 1041