Pairwise Alignments

Query, 362 a.a., Cobalt/zinc/cadmium efflux RND transporter, outer membrane protein CzcC from Variovorax sp. SCN45

Subject, 406 a.a., type I secretion protein TolC from Pseudomonas simiae WCS417

 Score =  255 bits (652), Expect = 1e-72
 Identities = 148/350 (42%), Positives = 211/350 (60%), Gaps = 3/350 (0%)

Query: 2   EGARVQAGVFQNPTLSVEVEDVRRDTRTTTVLLSQPFELGGKRGARIEAAERAIDVARAQ 61
           +G R QAG+  NP  S +VED RRD+RTT++ +SQ  ELGGKRGARI+ A R  D A   
Sbjct: 53  QGGRQQAGLIPNPVASWDVEDTRRDSRTTSIKISQALELGGKRGARIDVASRVQDAAALT 112

Query: 62  LETKYADIRANVTAAFFATLISQDRVRLAQASLELARTGSETAGKRVTAGKVSPVEETKA 121
           LE +   +RA V   ++  L +Q+R+ LAQ S+ LA  G   A  RVTAGK SPVE T+A
Sbjct: 113 LEQRRNSLRAEVIDNYYGALRAQERLDLAQRSMTLAERGLVVANGRVTAGKASPVEATRA 172

Query: 122 KVAEANVRLELVQARGELQTNLYQLRALTGPTVV-FDAV-DGNALQIPKPQAQETIEDRI 179
           +V  + +RLE  +A+  L     +L A TG     F AV   N   +  P A + +  R+
Sbjct: 173 QVQLSEIRLERDRAQMGLTDAYRRLAASTGSAAPNFQAVATRNPSTLAVPSATQLLA-RL 231

Query: 180 TSAPSMRQARLEVKRYGALSELEKAKRIPDITLNAGTMRSREVGRSQAVVGISVPLPIFD 239
                +R A L + +Y A   LEKA+RIPD+ ++ G+     V    ++VG+S+P+P+F+
Sbjct: 232 EQTAELRLAELSILQYEASIGLEKAQRIPDLDVSIGSQYDASVRERVSLVGVSMPIPLFN 291

Query: 240 TNRGNITEALRRQDKAEEDARALELRLRADVGGARQRYVTTLAEVEALQSDILPGAQTAF 299
            N+GN+  A RR D+A +   A ELRLR +   A   + +   EV      ILP AQ+A 
Sbjct: 292 RNQGNVLAATRRADQARDLRNATELRLRTETRQAVDLWQSANTEVRVFNQQILPAAQSAV 351

Query: 300 DAATKGFELGKFSYLDALDAQRTLLQARSQYLRSLSELHRSITDLDRLLG 349
           D+AT+GFE+GKFS+LD LDAQRTL+ AR+QYL + ++   +   ++R+ G
Sbjct: 352 DSATRGFEMGKFSFLDVLDAQRTLIAARTQYLTATAQATDAWVRIERIYG 401