Pairwise Alignments

Query, 362 a.a., Cobalt/zinc/cadmium efflux RND transporter, outer membrane protein CzcC from Variovorax sp. SCN45

Subject, 473 a.a., putative Multidrug efflux MFS outer membrane protein from Pseudomonas putida KT2440

 Score = 69.7 bits (169), Expect = 2e-16
 Identities = 77/331 (23%), Positives = 137/331 (41%), Gaps = 19/331 (5%)

Query: 34  LSQPFELGGKRGARIEAAERAIDVARAQLETKYADIRANVTAAFFATLISQDRVRLAQAS 93
           L+   ++ G+  A I+ A    + + A L+     + A  T A+        R+  A+ +
Sbjct: 146 LAYQVDIWGQVRAAIQRARVQAEASAAALDLVRLQVVAQTTRAYIDQCTYAARLEAAKQA 205

Query: 94  LELARTGSETAGKRVTAGKVSPVEETKAKVAEANVRLELVQARGELQTNLYQLRALTGPT 153
           L+      + + ++  AG  + ++  +       VR +L       Q  LY+L  L+G  
Sbjct: 206 LQTLDQSVQLSQRQRQAGVATALDSERLLGLREQVRAQLPMLSARRQMALYELSMLSGQA 265

Query: 154 VVFDAVDGNA---LQIPKPQAQ--ETIEDRITSAPSMRQARLEVKRYGALSELEKAKRIP 208
            V +A    A   L +P P       +E R    P +RQA  E++     +++ +A   P
Sbjct: 266 SVAEATTCVAIPTLSVPLPAGDGWHLLERR----PDVRQAERELQAATLETDIVRADLYP 321

Query: 209 DITLNAGTMRS----REVGRSQAVVGISVPL-----PIFDTNRGNITEALRRQDKAEEDA 259
            ++  A    S      +G S+AV+    PL     P    NR  +++A   Q       
Sbjct: 322 KVSFGASLTSSDHHLANLGDSRAVMFGIGPLIRWEFPNLKANRARVSKAEALQRAQVARY 381

Query: 260 RALELRLRADVGGARQRYVTTLAEVEALQSDILPGAQTAFDAATKGFELGKFSYLDALDA 319
           R + L    DV  A  RY      ++AL +  L  +Q +F  A   +  G    L  LD+
Sbjct: 382 RGVALSALKDVRQALARYDGERQRLQALDA-ALAHSQHSFALAQGNYRAGTVDGLALLDS 440

Query: 320 QRTLLQARSQYLRSLSELHRSITDLDRLLGG 350
           +R ++  R+ +  +   L ++  +L R LGG
Sbjct: 441 EREMISLRANHTEARGRLAQAQVNLFRALGG 471