Pairwise Alignments

Query, 1082 a.a., Cobalt/zinc/cadmium efflux RND transporter, transmembrane protein CzcA from Variovorax sp. SCN45

Subject, 1052 a.a., probable copper efflux transporter, CzcA family from Pseudomonas putida KT2440

 Score =  634 bits (1636), Expect = 0.0
 Identities = 379/1074 (35%), Positives = 607/1074 (56%), Gaps = 52/1074 (4%)

Query: 1    MFERIIRFAIEQRWLILLAVVAMAGLGVYNYQKLPIDAVPDITNVQVQINTGAPGYSPLE 60
            M E++IR+++  R L+LLA + +   G+++ + LPIDA+PD+++ QV I T  PG +P  
Sbjct: 1    MIEKLIRWSVSNRMLVLLATLFLMAWGIFSLRSLPIDALPDLSDAQVIIRTSYPGQAPQI 60

Query: 61   TEQRVTFPIETVMAGLPGLLQTRSLSRYGLSQVTVIFKDGTDVYFARQLVNERLQSASGE 120
             E +VT+P+ T M  +PG    R  S +G S V VIF+DGTD+Y+AR  V E L      
Sbjct: 61   VENQVTYPLTTTMLSVPGAKTVRGFSAFGDSFVYVIFEDGTDLYWARSRVLEYLSQVQSR 120

Query: 121  MPEGVHPQVGPISTGLGEIYLWTVEAKDGAKKPDGTPYTSTDLREIQDWIIKPQLRNVAG 180
            +P    P +GP +TG+G IY + +  + G        +    LR +QDW ++ +L+ V  
Sbjct: 121  LPATAKPALGPDATGVGWIYQYALVDRSGR-------HDLAQLRSLQDWFLRFELKTVPD 173

Query: 181  VTEINSIGGYEKQYQIAPIPEKLSAYGLSMADVVKALERNNTNVGAGYIERRGEQYLIRA 240
            V E+ SIGG  KQYQ+   P ++++ G++  +V  A+ + N   G G +E+   ++++RA
Sbjct: 174  VAEVASIGGMVKQYQVVLDPLRMASLGITQGEVANAIGKANQETGGGVLEQGEAEFMVRA 233

Query: 241  PGQARGVEDLRNI--ILSSNGSTPVRVRDVAEVGIGKELRTGAATDNGR-EVVLGTVFML 297
             G  + ++D R I   L++NG+ PV + DVA V +G E R G    +G  E V G V + 
Sbjct: 234  SGYLKTLDDFRAIPLRLAANGA-PVMLGDVARVQLGPEARRGIGELDGEGEAVGGVVILR 292

Query: 298  IGENSRIVSQAVAKKMADINRTLPEGVEAITVYDRTVLVDKAIATVKKNLLEGAVLVIVV 357
             G+N+R     V  K+  + ++LP GVE +T YDR+ L+D+A+  +   L+E  ++V +V
Sbjct: 293  SGKNAREAITHVKDKLETLKKSLPAGVELVTTYDRSQLIDRAVDNLSHKLIEEFIVVALV 352

Query: 358  LFLFLGNMRAAVITAMVIPLSMLFTFTGMVNQKVSANLMSLG--ALDFGIIIDGAVVIVE 415
               FL ++R++++  + +P+ +L     M +Q ++AN+MSLG  A+  G ++D AVV++E
Sbjct: 353  CAAFLWHLRSSLVAIVSLPVGVLIALIIMRHQGINANIMSLGGIAIAIGAMVDAAVVMIE 412

Query: 416  NCVRRLA--HAQHRHGRPLTRKERFHEVFAASQEARRALLFGQLIIMIVYLPIFALTGVE 473
            N  +R+   HA++  G+ L   E +  +  A+ E   AL F  +II + ++P+F L   E
Sbjct: 413  NAHKRVEAWHARY-PGQVLRGAEHWRVMTDAAVEVGPALFFSLMIITLSFVPVFTLQAQE 471

Query: 474  GKMFHPMALTVVIALLGAMILSVTFIPAAVALFI-GKKVSEKENRLMGWAKKAYEPLLVR 532
            G++F P+A T   A+  A  L+VT +P  +  +I G   +E+ N L     + Y P L  
Sbjct: 472  GRLFAPLAFTKTYAMAAAAGLAVTLVPVLMGYWIRGPLPAEERNPLNRGLIRVYRPALEV 531

Query: 533  VLEAKAVVLTVAGIAVVLAGLL-ATRLGSEFIPNLNEGDFAVQALRIPGTSLSQSVQMQQ 591
            VL    + L +  +A++L+ L   + LG EF+P L+EGD       +PG S  ++ ++ Q
Sbjct: 532  VLRRPWMTL-LGALAILLSSLWPLSHLGGEFLPPLDEGDLLYMPSALPGLSAQKASELLQ 590

Query: 592  QLERTLKEKFPEIDRIFARTGTAEIASDPMPPNISDAYVMLKPVDQWPEPRRTRQEVVQA 651
            + +R ++   PE+  +F + G AE A+DP P  + +  V LKP DQW  P  + +++V+ 
Sbjct: 591  RTDRLIR-TVPEVASVFGKAGRAESATDPAPLEMFETIVRLKPKDQW-RPGMSSEKLVEE 648

Query: 652  VQKEVSKIPGNNYEFSQPIQLRFNELVSGVRADVAVKVFGDDMDVLNKTAREIEGVLKSI 711
            + + V ++PG    +  PI+ R + L +G+++ + VKV G D+  ++ T   IE V KS+
Sbjct: 649  LDRTV-RVPGLTNIWIPPIRNRIDMLATGIKSPIGVKVAGSDLAQIDHTTLAIERVAKSV 707

Query: 712  SGAAEVNVEQTTGLPMLTVNIDRDKATRYGLNIADVQDTIATAIGGRNAGTLFEGDRRFD 771
             G      E+ TG   + ++IDR  A RYGLNIADVQ  +A AIGG   G   EG  R+ 
Sbjct: 708  PGVTSALAERLTGGRYVDLDIDRQAAARYGLNIADVQAIVAGAIGGETIGETVEGLARYP 767

Query: 772  IVVRLPDNVRGDLEAIKRLPIALPASSAAADVVGATSVAGAGANAARVNFIPLGEVATLE 831
            I VR P   R  ++A+++LP+                        A+   I LG VA + 
Sbjct: 768  ISVRYPREWRDSVDALRQLPV----------------------YTAQGGQITLGTVARVG 805

Query: 832  LAPGPNQVSREDGKRRIVVSANVRGRDLGSFVSEAAGALDSQVKVPTGYWTTWGGQFENL 891
            +A GP  +  E+ +    V  +VRGRDL S V++   A+D +VK+  G   ++ GQFE L
Sbjct: 806  IAEGPPMLKSENARPSGWVYIDVRGRDLSSVVADLRRAVDREVKLNPGMSLSYSGQFEYL 865

Query: 892  QSATKRLQIVVPVALLLVFTLLFAMFGNMKDGLIVFTGIPFALTGGILALWLRDIPLSIT 951
            + A  RL  VVP  L ++F LL+  FG M + L++   +PFALTGG+  L+L    LS+ 
Sbjct: 866  ERANARLAWVVPATLAIIFVLLYLTFGRMGEALLIMGTLPFALTGGVWLLYLMGFNLSVA 925

Query: 952  AAVGFIALSGVAVLNGLVMISFIRNL-REGGASLDH-------AIHEGALTRLRPVLMTA 1003
              VGFIAL+GVA   G++M+ ++ N   E  A+ +H       AI EGA+ R+RP  MT 
Sbjct: 926  TGVGFIALAGVAAEFGVIMLIYLNNAWAERQANSEHTQDALLEAIREGAVQRIRPKAMTV 985

Query: 1004 LVASLGFVPMAIATGTGAEVQQPLATVVIGGILSSTALTLLVLPVLYRLAHGRD 1057
             V   G +P+  + GTG+EV   +A  ++GG+L++  L+L V+P  Y L   RD
Sbjct: 986  AVIVAGLLPILWSNGTGSEVMSRIAVPMVGGMLTAPLLSLFVIPAAYWLVRRRD 1039