Pairwise Alignments

Query, 405 a.a., Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family from Variovorax sp. SCN45

Subject, 490 a.a., Probable copper RND efflux membrane fusion protein, CzcB family from Pseudomonas putida KT2440

 Score = 88.6 bits (218), Expect = 4e-22
 Identities = 81/302 (26%), Positives = 137/302 (45%), Gaps = 27/302 (8%)

Query: 108 RVATVAASLGDNVRTGQSLATLDSLAVGEASSALSQARSAQRVADADYKRATALQAEEII 167
           R+ATV+       R  ++L     LA  E   ++ QAR+A  V +  Y RAT     +  
Sbjct: 97  RLATVSRG-----RLQRTLQVSGVLAFDERDFSVLQARTAGFV-ERTYGRATGDVVAKGA 150

Query: 168 PQKDYLRAK----------AEHEKASATLRAAEDHLRLLGVPS------GQSAGVTSVFP 211
           P  D L  +            H      L AA   L L G+P        +S  V +   
Sbjct: 151 PLADVLAPEWAGLQEEFLALRHLGDVQLLAAARQRLLLAGMPGELVDRVARSGKVQNQVT 210

Query: 212 LTSPLAGTIIEKKAVVGGLAGPSDALFVVADLSTLWIEANLAEAQLAKVRVGAKATVTVG 271
           L +P AG I       G    P   L  +  ++ +W+EA + EAQ + +  G      + 
Sbjct: 211 LVAPSAGVIQALDLRPGMTVTPGATLARINGIANVWLEAAVPEAQASGLHEGQAVEAHLP 270

Query: 272 AYPDERFEGRVTYVASILDKETRSIPARIEVKNGEGRLKPEMFATATIESPSPQSAPKTD 331
           AYP E  +G++T + +  D ++R++  RIE+ N +GRL+P M A  ++  P   +    D
Sbjct: 271 AYPGETVQGKLTALLADADLQSRTLRLRIELPNKDGRLRPGMTAQVSLR-PGENA---DD 326

Query: 332 VLTVPDQAIVLMQGQPNVFVFEN-GAYEQRAIDPGDRLGTRTVVKSGVKAGEQVVSAGTY 390
            L +P +A++    +  V V E+ G +    +  G   G +  +  G++AG++VV++G +
Sbjct: 327 SLLLPAEAVIRTGKRDLVMVAEDQGRFRPIEVVLGQENGGQVAILKGLQAGQKVVASGQF 386

Query: 391 AL 392
            +
Sbjct: 387 LI 388