Pairwise Alignments

Query, 405 a.a., Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family from Variovorax sp. SCN45

Subject, 406 a.a., RND efflux membrane fusion protein-related protein from Pseudomonas putida KT2440

 Score = 97.8 bits (242), Expect = 5e-25
 Identities = 78/305 (25%), Positives = 142/305 (46%), Gaps = 39/305 (12%)

Query: 105 VEGRVATVAASLGDNVRTGQSLATLDSLAVGEASSALSQARSAQRVADADYKRATALQAE 164
           VEG V ++    G  V+ GQ L  L+     + ++ L  A +   +A  D+ R + L  +
Sbjct: 97  VEGIVKSLHFDSGQQVKAGQLLLQLND---DQETALLGTALADLGLAKVDFGRGSQLVGD 153

Query: 165 EIIPQKDYLRAKAEHEKASATLRAAEDHLRLLGVPSGQSAGVTSVFPLTSPLAGTIIEKK 224
             I + ++ R  +++ +  A +    + L+   +             + +P +GTI  ++
Sbjct: 154 SAISRGEFDRLSSQYRRNQAVV----EQLKAQKIKKR----------INAPFSGTIGIRQ 199

Query: 225 AVVGGLAGPSDALFVVADLSTLWIEANLAEAQLAKVRVGAKATVTVGAYPDERFEGRVTY 284
             +G        +  + D S+L+++ N+ E  L  + +G +  V V AYP +RF G ++ 
Sbjct: 200 VDIGQYLAAGTVIATLQDTSSLYVDFNVPEQALPHLSLGQQVLVQVAAYPGQRFPGSLSA 259

Query: 285 VASILDKETRSIPARIEVKNGEGRLKPEMFATATIESPSPQSAPKTDVLTVPDQAIVLMQ 344
           +   +++ TR++  R  + N +G+L P MFA+  I  P+PQ       + VP+ AI    
Sbjct: 260 INPKVEETTRNLLVRATMANPDGKLLPGMFASLLILLPNPQPQ-----VVVPESAITYTL 314

Query: 345 GQPNVFVF-----ENG------------AYEQRAIDPGDRLGTRTVVKSGVKAGEQVVSA 387
              +V+V      ++G              EQR +  G+R     VV  G++AGEQVV+A
Sbjct: 315 YGNSVYVASPRKDKDGKPVYDDKGQPQLVAEQRTVKTGERRDGVVVVSEGLQAGEQVVTA 374

Query: 388 GTYAL 392
           G   L
Sbjct: 375 GQLKL 379