Pairwise Alignments

Query, 1041 a.a., CzcABC family efflux RND transporter, transmembrane protein from Variovorax sp. SCN45

Subject, 1052 a.a., probable copper efflux transporter, CzcA family from Pseudomonas putida KT2440

 Score =  620 bits (1600), Expect = 0.0
 Identities = 364/1045 (34%), Positives = 596/1045 (57%), Gaps = 25/1045 (2%)

Query: 1    MLNALVDASLRYKVLVLVFFAVLVGLGVQAFRNVPVDAFPDVTPVQVNIYTESPGLAAED 60
            M+  L+  S+  ++LVL+    L+  G+ + R++P+DA PD++  QV I T  PG A + 
Sbjct: 1    MIEKLIRWSVSNRMLVLLATLFLMAWGIFSLRSLPIDALPDLSDAQVIIRTSYPGQAPQI 60

Query: 61   VEKLLTTPIEGAMAGLPGVEEVRSVSLFGLSYVGVYFKDDVDIYFARRLVGEKLQEAKGR 120
            VE  +T P+   M  +PG + VR  S FG S+V V F+D  D+Y+AR  V E L + + R
Sbjct: 61   VENQVTYPLTTTMLSVPGAKTVRGFSAFGDSFVYVIFEDGTDLYWARSRVLEYLSQVQSR 120

Query: 121  LPQGYGEPVLGPNSSGLGQVFWYTVESEDKKMSTMDLRTLHDWTVRLILRTAPGVDDIVS 180
            LP    +P LGP+++G+G ++ Y +     +     LR+L DW +R  L+T P V ++ S
Sbjct: 121  LP-ATAKPALGPDATGVGWIYQYALVDRSGRHDLAQLRSLQDWFLRFELKTVPDVAEVAS 179

Query: 181  WGGEQKQFQVQIDPRKLIQYSVSFKEVMERLTANNKQVGGQSINLGAEQFLVRGLGLVGT 240
             GG  KQ+QV +DP ++    ++  EV   +   N++ GG  +  G  +F+VR  G + T
Sbjct: 180  IGGMVKQYQVVLDPLRMASLGITQGEVANAIGKANQETGGGVLEQGEAEFMVRASGYLKT 239

Query: 241  TKDIEQIVIA-ERNGAPVYVRNVAQVKEAPAPRFGAVTRDGK-EAVLGIALARVNENAKN 298
              D   I +    NGAPV + +VA+V+  P  R G    DG+ EAV G+ + R  +NA+ 
Sbjct: 240  LDDFRAIPLRLAANGAPVMLGDVARVQLGPEARRGIGELDGEGEAVGGVVILRSGKNARE 299

Query: 299  VVDAVKAKLAVAQAALPKGVTLQPVYDRTELVKKALNTAESSLVEGAILVAVILFLFLGE 358
             +  VK KL   + +LP GV L   YDR++L+ +A++     L+E  I+VA++   FL  
Sbjct: 300  AITHVKDKLETLKKSLPAGVELVTTYDRSQLIDRAVDNLSHKLIEEFIVVALVCAAFLWH 359

Query: 359  FRSAIVVVITLPMAMLIAFILMQQFGVSANLMSLAGLAIGTGMMVDGAVVMVENAFRLLA 418
             RS++V +++LP+ +LIA I+M+  G++AN+MSL G+AI  G MVD AVVM+ENA + + 
Sbjct: 360  LRSSLVAIVSLPVGVLIALIIMRHQGINANIMSLGGIAIAIGAMVDAAVVMIENAHKRVE 419

Query: 419  --HAKESGKPIQKTH---LILEAAREVVNPIAFAILIIIVVFLPLFSLTGLEGKLFKPMA 473
              HA+  G+ ++      ++ +AA EV   + F+++II + F+P+F+L   EG+LF P+A
Sbjct: 420  AWHARYPGQVLRGAEHWRVMTDAAVEVGPALFFSLMIITLSFVPVFTLQAQEGRLFAPLA 479

Query: 474  YTITFAMAGSLLLSLTLVPVLAAMILK---PKEEKDTFLVRRAKRIYLPLLDWALERKRL 530
            +T T+AMA +  L++TLVPVL    ++   P EE++  L R   R+Y P L+  L R  +
Sbjct: 480  FTKTYAMAAAAGLAVTLVPVLMGYWIRGPLPAEERNP-LNRGLIRVYRPALEVVLRRPWM 538

Query: 531  VVGSAIVLLLASLALFPFLGKEFMPQLQEGTIQFRVTGIPSTSLDESIRVSNEVSAALRK 590
             +  A+ +LL+SL     LG EF+P L EG + +  + +P  S  ++  +       +R 
Sbjct: 539  TLLGALAILLSSLWPLSHLGGEFLPPLDEGDLLYMPSALPGLSAQKASELLQRTDRLIRT 598

Query: 591  QFPQVRSVLATIGRAEGG-ETTDVNYMELNLDTKPAEEWPEKISYGKLASDMQEALEKVV 649
              P+V SV    GRAE   +   +   E  +  KP ++W   +S  KL  ++   +   V
Sbjct: 599  -VPEVASVFGKAGRAESATDPAPLEMFETIVRLKPKDQWRPGMSSEKLVEELDRTVR--V 655

Query: 650  PTVVFGATQPIQSRVEELISGVRATLALKLYGEDLATLDRLTGKIQGVLGKIPGIADLSA 709
            P +      PI++R++ L +G+++ + +K+ G DLA +D  T  I+ V   +PG+    A
Sbjct: 656  PGLTNIWIPPIRNRIDMLATGIKSPIGVKVAGSDLAQIDHTTLAIERVAKSVPGVTSALA 715

Query: 710  EANKGKPQLIIKVNRDAAARYGINADEILEVVQSGIGGSAVSTLIDGTKRFEIAVRLSDE 769
            E   G   + + ++R AAARYG+N  ++  +V   IGG  +   ++G  R+ I+VR   E
Sbjct: 716  ERLTGGRYVDLDIDRQAAARYGLNIADVQAIVAGAIGGETIGETVEGLARYPISVRYPRE 775

Query: 770  FRVSPAAIASIPIRTGGGALVPFSQVASIELDEGYSFIRRESLQRYSVLQMDVKGRDVDS 829
            +R S  A+  +P+ T  G  +    VA + + EG   ++ E+ +    + +DV+GRD+ S
Sbjct: 776  WRDSVDALRQLPVYTAQGGQITLGTVARVGIAEGPPMLKSENARPSGWVYIDVRGRDLSS 835

Query: 830  FVKEADTQLKAQVELPTGYWIEWGGSFENQQRAMARLGVIVPLTIGLIFILLYTAFNSVR 889
             V +    +  +V+L  G  + + G FE  +RA ARL  +VP T+ +IF+LLY  F  + 
Sbjct: 836  VVADLRRAVDREVKLNPGMSLSYSGQFEYLERANARLAWVVPATLAIIFVLLYLTFGRMG 895

Query: 890  HATLIIANVPFAIIGGIVGLFVSGQYLSVPSAIGFIAVFGVAMLNGIVMVTFLND--LRR 947
             A LI+  +PFA+ GG+  L++ G  LSV + +GFIA+ GVA   G++M+ +LN+    R
Sbjct: 896  EALLIMGTLPFALTGGVWLLYLMGFNLSVATGVGFIALAGVAAEFGVIMLIYLNNAWAER 955

Query: 948  QGL------PIREAVQQGAALRLRPVLMTASVAILGLIPMLLSTGVGAETQRPLATVVVG 1001
            Q         + EA+++GA  R+RP  MT +V + GL+P+L S G G+E    +A  +VG
Sbjct: 956  QANSEHTQDALLEAIREGAVQRIRPKAMTVAVIVAGLLPILWSNGTGSEVMSRIAVPMVG 1015

Query: 1002 GLFTSTALTLLILPLMYEWAEQRAE 1026
            G+ T+  L+L ++P  Y W  +R +
Sbjct: 1016 GMLTAPLLSLFVIPAAY-WLVRRRD 1039