Pairwise Alignments

Query, 1041 a.a., CzcABC family efflux RND transporter, transmembrane protein from Variovorax sp. SCN45

Subject, 1053 a.a., cation efflux system protein from Pseudomonas putida KT2440

 Score =  820 bits (2118), Expect = 0.0
 Identities = 442/1048 (42%), Positives = 657/1048 (62%), Gaps = 26/1048 (2%)

Query: 1    MLNALVDASLRYKVLVLVFFAVLVGLGVQAFRNVPVDAFPDVTPVQVNIYTESPGLAAED 60
            M   ++  ++  +++V++   ++ G+G+ +++ +P+DA PD+T VQV I T +PG +  +
Sbjct: 1    MFERIIRFAIEQRIVVMIAVLIMAGIGIYSYQKLPIDAVPDITNVQVQINTAAPGYSPLE 60

Query: 61   VEKLLTTPIEGAMAGLPGVEEVRSVSLFGLSYVGVYFKDDVDIYFARRLVGEKLQEAKGR 120
             E+ +T P+E AMAGLPG+++ RS+S  GLS V V FKD  DI+FAR+L+ E+LQ AK +
Sbjct: 61   TEQRITFPVETAMAGLPGLQQTRSLSRSGLSQVTVIFKDGTDIFFARQLINERLQVAKEQ 120

Query: 121  LPQGYGEPVLGPNSSGLGQVFWYTVESEDKKM-------STMDLRTLHDWTVRLILRTAP 173
            LP+G  E V+GP S+GLG++F +TVE+ED  +       +  DLR + DW ++  LR  P
Sbjct: 121  LPEGV-EAVMGPVSTGLGEIFLWTVEAEDGAVKEDGTPYTPTDLRVIQDWIIKPQLRNVP 179

Query: 174  GVDDIVSWGGEQKQFQVQIDPRKLIQYSVSFKEVMERLTANNKQVGGQSINLGAEQFLVR 233
            GV +I + GG  KQF V  DP++L  Y ++  +++  L +NN  VG   I    EQ L+R
Sbjct: 180  GVAEINTIGGYAKQFLVAPDPKRLATYKLTLNDLVAALESNNANVGAGYIERNGEQLLIR 239

Query: 234  GLGLVGTTKDIEQIVIAERNGAPVYVRNVAQVKEAPAPRFGAVTRDGKEAVLGIALARVN 293
              G VG  +DI  IVI   +GAP+ + +VA V      R GA T +G+E VLG     + 
Sbjct: 240  APGQVGNIEDIANIVITSVDGAPIRISSVADVSIGKELRTGAATENGREVVLGTVFMLIG 299

Query: 294  ENAKNVVDAVKAKLAVAQAALPKGVTLQPVYDRTELVKKALNTAESSLVEGAILVAVILF 353
            EN++ V  AV AKLA     LPKGV    VYDRT LV+KA+ T + +LVEGAILV  ILF
Sbjct: 300  ENSRTVSQAVAAKLADINRTLPKGVVAVTVYDRTNLVEKAIATVKKNLVEGAILVIAILF 359

Query: 354  LFLGEFRSAIVVVITLPMAMLIAFILMQQFGVSANLMSLAGLAIGTGMMVDGAVVMVENA 413
            LFLG  R+A++  + +P++ML  F  M    VSANLMSL   A+  G++VDGAVV+VENA
Sbjct: 360  LFLGNIRAALITAMVIPLSMLFTFTGMFNNKVSANLMSLG--ALDFGIIVDGAVVIVENA 417

Query: 414  FRLLAHAKES-GKPIQKT---HLILEAAREVVNPIAFAILIIIVVFLPLFSLTGLEGKLF 469
             R LAHA+   G+ + KT   H +  AARE   P+ F  LII+VV+LP+F+LTG+EGK+F
Sbjct: 418  IRRLAHAQHKHGRMLTKTERFHEVFAAAREARRPLIFGQLIIMVVYLPIFALTGVEGKMF 477

Query: 470  KPMAYTITFAMAGSLLLSLTLVPVLAAMILKPKEEKDTFLVRRAKRI-YLPLLDWALERK 528
             PMA+T+  A+ G+++LS+T VP   AM +  K +++  +V R  R+ Y P+L W L  +
Sbjct: 478  HPMAFTVVMALLGAMVLSVTFVPAAIAMFVTGKVKEEEGVVMRTARLRYEPVLQWVLGHR 537

Query: 529  RLVVGSAIVLLLASLALFPFLGKEFMPQLQEGTIQFRVTGIPSTSLDESIRVSNEVSAAL 588
             +   +A+ L++ S  L   +G EF+P L EG    +   +P TSL +S+ +   +  A+
Sbjct: 538  NIAFSAAVALVVLSGLLASRMGSEFIPSLSEGDFAMQAMRVPGTSLTQSVEMQQRLEKAV 597

Query: 589  RKQFPQVRSVLATIGRAE-GGETTDVNYMELNLDTKPAEEWPE-KISYGKLASDMQEALE 646
              Q P+V  + A  G AE   +    N  +  +  KP ++WP  K    +L +++Q+A  
Sbjct: 598  IAQVPEVERMFARSGTAEIASDPMPPNASDAYIMLKPQDQWPNPKKPRDELIAEVQKAAA 657

Query: 647  KVVPTVVFGATQPIQSRVEELISGVRATLALKLYGEDLATLDRLTGKIQGVLGKIPGIAD 706
             V P   +  +QPIQ R  ELISGVR+ +A+K++G+D+  L+    KI   L  +PG ++
Sbjct: 658  GV-PGSNYELSQPIQLRFNELISGVRSDVAVKVFGDDMDVLNNTANKIAAALKAVPGSSE 716

Query: 707  LSAEANKGKPQLIIKVNRDAAARYGINADEILEVVQSGIGGSAVSTLIDGTKRFEIAVRL 766
            +  E   G P L I ++R+ AARYG+N  ++   +   +GG    TL +G +RF++ VRL
Sbjct: 717  VKVEQTSGLPVLTINIDREKAARYGLNIADVQNSIAIAVGGRQAGTLYEGDRRFDMVVRL 776

Query: 767  SDEFRVSPAAIAS----IPIRTGGGA----LVPFSQVASIELDEGYSFIRRESLQRYSVL 818
             +  R   A ++S    +P     GA     +P SQVA+++L  G + I RE+ +R  ++
Sbjct: 777  PETVRTDVAGMSSLLIPVPANAAQGANQIGFIPLSQVANLDLQLGPNQISRENGKRLVIV 836

Query: 819  QMDVKGRDVDSFVKEADTQLKAQVELPTGYWIEWGGSFENQQRAMARLGVIVPLTIGLIF 878
              +V+GRD+ SFV+EA   L  +V++P GYW  WGG FE  Q A  RL ++VP+ + L+ 
Sbjct: 837  SANVRGRDLGSFVEEATASLDKKVQIPAGYWTTWGGQFEQLQSAAKRLQIVVPVALLLVM 896

Query: 879  ILLYTAFNSVRHATLIIANVPFAIIGGIVGLFVSGQYLSVPSAIGFIAVFGVAMLNGIVM 938
             LL+  FN+++   L+   +PFA+ GG+V L++    LS+ + +GFIA+ GVA+LNG+VM
Sbjct: 897  TLLFLMFNNLKDGMLVFTGIPFALTGGVVALWLRDIPLSISAGVGFIALSGVAVLNGLVM 956

Query: 939  VTFLNDLRRQGLPIREAVQQGAALRLRPVLMTASVAILGLIPMLLSTGVGAETQRPLATV 998
            + F+  LR +G  +R+AV +GA  RLRPVLMTA VA LG IPM L+TG GAE QRPLATV
Sbjct: 957  IAFIRGLREEGRTLRQAVDEGALTRLRPVLMTALVASLGFIPMALATGTGAEVQRPLATV 1016

Query: 999  VVGGLFTSTALTLLILPLMYEWAEQRAE 1026
            V+GG+ +STALTLL+LP +Y WA ++ E
Sbjct: 1017 VIGGILSSTALTLLVLPALYHWAHRKDE 1044