Pairwise Alignments

Query, 1041 a.a., CzcABC family efflux RND transporter, transmembrane protein from Variovorax sp. SCN45

Subject, 1047 a.a., copper/silver efflux system, membrane component (NCBI) from Escherichia coli BW25113

 Score =  622 bits (1603), Expect = 0.0
 Identities = 372/1051 (35%), Positives = 597/1051 (56%), Gaps = 27/1051 (2%)

Query: 1    MLNALVDASLRYKVLVLVFFAVLVGLGVQAFRNVPVDAFPDVTPVQVNIYTESPGLAAED 60
            M+  ++  S+  + LVL+    L   G     N PVDA PD++ VQV I T  PG A + 
Sbjct: 1    MIEWIIRRSVANRFLVLMGALFLSIWGTWTIINTPVDALPDLSDVQVIIKTSYPGQAPQI 60

Query: 61   VEKLLTTPIEGAMAGLPGVEEVRSVSLFGLSYVGVYFKDDVDIYFARRLVGEKLQEAKGR 120
            VE  +T P+   M  +PG + VR  S FG SYV V F+D  D Y+AR  V E L + +G+
Sbjct: 61   VENQVTYPLTTTMLSVPGAKTVRGFSQFGDSYVYVIFEDGTDPYWARSRVLEYLNQVQGK 120

Query: 121  LPQGYGEPVLGPNSSGLGQVFWYTVESEDKKMSTMDLRTLHDWTVRLILRTAPGVDDIVS 180
            LP G     LGP+++G+G ++ Y +     K    DLR+L DW ++  L+T P V ++ S
Sbjct: 121  LPAGVSAE-LGPDATGVGWIYEYALVDRSGKHDLADLRSLQDWFLKYELKTIPDVAEVAS 179

Query: 181  WGGEQKQFQVQIDPRKLIQYSVSFKEVMERLTANNKQVGGQSINLGAEQFLVRGLGLVGT 240
             GG  K++QV IDP++L QY +S  EV   L A+N++ GG SI L   +++VR  G + T
Sbjct: 180  VGGVVKEYQVVIDPQRLAQYGISLAEVKSALDASNQEAGGSSIELAEAEYMVRASGYLQT 239

Query: 241  TKDIEQIVI-AERNGAPVYVRNVAQVKEAPAPRFGAVTRDGK-EAVLGIALARVNENAKN 298
              D   IV+ A  NG PVY+R+VA+V+  P  R G    +G+ E   G+ + R  +NA+ 
Sbjct: 240  LDDFNHIVLKASENGVPVYLRDVAKVQIGPEMRRGIAELNGEGEVAGGVVILRSGKNARE 299

Query: 299  VVDAVKAKLAVAQAALPKGVTLQPVYDRTELVKKALNTAESSLVEGAILVAVILFLFLGE 358
            V+ AVK KL   +++LP+GV +   YDR++L+ +A++     L+E  I+VAV+  LFL  
Sbjct: 300  VIAAVKDKLETLKSSLPEGVEIVTTYDRSQLIDRAIDNLSGKLLEEFIVVAVVCALFLWH 359

Query: 359  FRSAIVVVITLPMAMLIAFILMQQFGVSANLMSLAGLAIGTGMMVDGAVVMVENAFRLLA 418
             RSA+V +I+LP+ + IAFI+M   G++AN+MSL G+AI  G MVD A+VM+ENA + L 
Sbjct: 360  VRSALVAIISLPLGLCIAFIVMHFQGLNANIMSLGGIAIAVGAMVDAAIVMIENAHKRLE 419

Query: 419  ---HAKESGKPIQKTH--LILEAAREVVNPIAFAILIIIVVFLPLFSLTGLEGKLFKPMA 473
               H         KT   +I +A+ EV   +  ++LII + F+P+F+L G EG+LF P+A
Sbjct: 420  EWQHQHPDATLDNKTRWQVITDASVEVGPALFISLLIITLSFIPIFTLEGQEGRLFGPLA 479

Query: 474  YTITFAMAGSLLLSLTLVPVLAAMILKPK--EEKDTFLVRRAKRIYLPLLDWALERKRLV 531
            +T T+AMAG+ LL++ ++P+L    ++ K   E    L R   R+Y PLL   L   +  
Sbjct: 480  FTKTYAMAGAALLAIVVIPILMGYWIRGKIPPESSNPLNRFLIRVYHPLLLKVLHWPKTT 539

Query: 532  VGSAIVLLLASLALFPFLGKEFMPQLQEGTIQFRVTGIPSTSLDESIRVSNEVSAALRKQ 591
            +  A + +L  L     +G EF+PQ+ EG + +  + +P  S  E+  +  +    +   
Sbjct: 540  LLVAALSVLTVLWPLNKVGGEFLPQINEGDLLYMPSTLPGISAAEAASMLQKTDKLIMS- 598

Query: 592  FPQVRSVLATIGRAEGG-ETTDVNYMELNLDTKPAEEWPEKISYGKLASDMQEALEKVVP 650
             P+V  V    G+AE   ++  +  +E  +  KP E+W   ++  K+  ++   +   +P
Sbjct: 599  VPEVARVFGKTGKAETATDSAPLEMVETTIQLKPQEQWRPGMTMDKIIEELDNTVR--LP 656

Query: 651  TVVFGATQPIQSRVEELISGVRATLALKLYGEDLATLDRLTGKIQGVLGKIPGIADLSAE 710
             +      PI++R++ L +G+++ + +K+ G  LA +D +  +I+ V   +PG+A   AE
Sbjct: 657  GLANLWVPPIRNRIDMLSTGIKSPIGIKVSGTVLADIDAMAEQIEEVARTVPGVASALAE 716

Query: 711  ANKGKPQLIIKVNRDAAARYGINADEILEVVQSGIGGSAVSTLIDGTKRFEIAVRLSDEF 770
              +G   + +++NR+ AARYG+   ++   V S +GG+ V   ++G  R+ I +R    +
Sbjct: 717  RLEGGRYINVEINREKAARYGMTVADVQLFVTSAVGGAMVGETVEGIARYPINLRYPQSW 776

Query: 771  RVSPAAIASIPIRTGGGALVPFSQVASIELDEGYSFIRRESLQRYSVLQMDVKGRDVDSF 830
            R SP A+  +PI T     +  + VA I++  G S ++ E+ +  S + +D + RD+ S 
Sbjct: 777  RDSPQALRQLPILTPMKQQITLADVADIKVSTGPSMLKTENARPTSWIYIDARDRDMVSV 836

Query: 831  VKEADTQLKAQVELPTGYWIEWGGSFENQQRAMARLGVIVPLTIGLIFILLYTAFNSVRH 890
            V +    +  +V+L  G  + + G FE  +RA  +L ++VP+T+ +IF+LLY AF  V  
Sbjct: 837  VHDLQKAIAEKVQLKPGTSVAFSGQFELLERANHKLKLMVPMTLMIIFVLLYLAFRRVGE 896

Query: 891  ATLIIANVPFAIIGGIVGLFVSGQYLSVPSAIGFIAVFGVAMLNGIVMVTFL-------- 942
            A LII++VPFA++GGI  L+  G +LSV +  GFIA+ GVA   G+VM+ +L        
Sbjct: 897  ALLIISSVPFALVGGIWLLWWMGFHLSVATGTGFIALAGVAAEFGVVMLMYLRHAIEAVP 956

Query: 943  ---NDLRRQGLPIREAVQQGAALRLRPVLMTASVAILGLIPMLLSTGVGAETQRPLATVV 999
               N        + EA+  GA LR+RP  MT +V I GL+P+L  TG G+E    +A  +
Sbjct: 957  SLNNPQTFSEQKLDEALYHGAVLRVRPKAMTVAVIIAGLLPILWGTGAGSEVMSRIAAPM 1016

Query: 1000 VGGLFTSTALTLLILPLMYE--WAEQRAERR 1028
            +GG+ T+  L+L I+P  Y+  W  +   R+
Sbjct: 1017 IGGMITAPLLSLFIIPAAYKLMWLHRHRVRK 1047