Pairwise Alignments

Query, 1041 a.a., CzcABC family efflux RND transporter, transmembrane protein from Variovorax sp. SCN45

Subject, 1481 a.a., heavy metal efflux pump (cobalt-zinc-cadmium) from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  734 bits (1895), Expect = 0.0
 Identities = 400/1055 (37%), Positives = 630/1055 (59%), Gaps = 29/1055 (2%)

Query: 1    MLNALVDASLRYKVLVLVFFAVLVGLGVQAFRNVPVDAFPDVTPVQVNIYTESPGLAAED 60
            M+N ++  S++ K +V +    L+G+G+ +   V + + PD+T  QV + T SP LA ED
Sbjct: 1    MINKIISFSIKNKFIVGLLTLALIGVGIYSMSTVNLGSVPDITNNQVQVITVSPNLATED 60

Query: 61   VEKLLTTPIEGAMAGLPGVEEVRSVSLFGLSYVGVYFKDDVDIYFARRLVGEKLQEAKGR 120
            +E+ +T P+E AM  LPGV+E+RS+S FGLS V + F+DD+  Y  R+LV EKL E +  
Sbjct: 61   IEQFVTYPVELAMGNLPGVDEIRSISRFGLSVVTIVFEDDMGTYLPRQLVQEKLNELQET 120

Query: 121  LPQGYGEPVLGPNSSGLGQVFWYTVESED---KKMSTMDLRTLHDWTVRLILRTAPGVDD 177
            +PQ +G P +GP S+GLGQ++ YT++ ++    + S M+LRT+ +W V+  L    GV +
Sbjct: 121  IPQKFGSPTMGPISTGLGQIYEYTIQPQEGYESQYSPMELRTIQEWIVKRQLTLLDGVVE 180

Query: 178  IVSWGGEQKQFQVQIDPRKLIQYSVSFKEVMERLTANNKQVGGQSINLGAEQFLVRGLGL 237
            + S+GG  KQ++V I+P KL   +VS  EV E L  NN   GG  I        +RG GL
Sbjct: 181  VNSFGGYIKQYEVAINPEKLNAMNVSISEVYEALARNNVNTGGAYIEKNRMSNFIRGEGL 240

Query: 238  VGTTKDIEQIVIAERNGAPVYVRNVAQ-VKEAPAPRFGAVTRDGKEAVLGIALARVNENA 296
            V +  DI +IVI   NG P+ + +VA+ V      R+GA T+DGKEAV GI +     N 
Sbjct: 241  VRSLDDIRKIVITTENGLPITIGDVAEKVHFGNQVRYGAFTQDGKEAVGGIIMMLKGSNP 300

Query: 297  KNVVDAVKAKLAVAQAALPKGVTLQPVYDRTELVKKALNTAESSLVEGAILVAVILFLFL 356
              V+  VK ++   + +LP+G+ +  + DR++L+ +  +T + +L+EGA++V   L + L
Sbjct: 301  NAVIQNVKERMEEVEKSLPEGLAINSIIDRSDLISRTTDTVKQNLIEGALIVIFALVILL 360

Query: 357  GEFRSAIVVVITLPMAMLIAFILMQQFGVSANLMSLAGLAIGTGMMVDGAVVMVENAFRL 416
            G  R  I+   T+P+++L AFILM+QF V ANLMSL   AI  G+++DGAV+++E     
Sbjct: 361  GSLRGGIITATTIPLSLLFAFILMKQFNVWANLMSLG--AIDFGIIIDGAVIIIEGTVYE 418

Query: 417  LAHAKESGK----PIQKTHLILEAAREVVNPIAFAILIIIVVFLPLFSLTGLEGKLFKPM 472
            +     SGK     +    +  +A   +++   F  +II++VF P+  LTG+EGK+F+PM
Sbjct: 419  IQKRIRSGKIKFNQVVMDEVAYDAGSTMMSSAFFGQIIILIVFAPILFLTGVEGKMFQPM 478

Query: 473  AYTITFAMAGSLLLSLTLVPVLAAMILKPKEEKDTFLVRRAKRI--------------YL 518
            AYT  FAM G+++L LT VP+++A+ +KP + K  +  R  + +              YL
Sbjct: 479  AYTFGFAMIGAIILCLTYVPMMSALFMKPIQNKKNWFGRFERWLEKVSDKIIGGIQYAYL 538

Query: 519  PLLDWALERKRLVVGSAIVLLLASLALFPFLGKEFMPQLQEGTIQFRVTGIPSTSLDESI 578
            PLL  AL  K +V+  AIVLL  +  +F  +G EF+PQL EG I  +    P +SL ES 
Sbjct: 539  PLLKSALRFKAVVIIVAIVLLGLAGFIFSRMGGEFVPQLDEGDIAMQALIRPGSSLSESK 598

Query: 579  RVSNEVSAALRKQFPQVRSVLATIGRAE---GGETTDVNYMELNLDTKPAEEWPEKISYG 635
             VS ++   L K FP++++V A IG A+        D+  M L L+ K  ++W    +  
Sbjct: 599  DVSIKIEELLLKSFPEIKTVTARIGVADIPTDPMPMDIADMYLILE-KDKDQWVSAETKD 657

Query: 636  KLASDMQEALEKVVPTVVFGATQPIQSRVEELISGVRATLALKLYGEDLATLDRLTGKIQ 695
            +L   +++ LE  +  V    TQP++ R  EL+ GVR  +A+KLYGEDL  L     ++ 
Sbjct: 658  ELIEQIKDKLETNMTGVNLVFTQPVELRFNELLEGVREDIAVKLYGEDLEMLSAKVQEMA 717

Query: 696  GVLGKIPGIADLSAEANKGKPQLIIKVNRDAAARYGINADEILEVVQSGIGGSAVSTLID 755
             ++  +PG  D++ E   G PQ+ ++ NRD  A+YG++  ++ E V +   G     + +
Sbjct: 718  DIISTVPGAGDVNPERTSGLPQMTVRYNRDKVAQYGLDIQKLNEYVSTAFAGGVAGVIFE 777

Query: 756  GTKRFEIAVRLSDEFRVSPAAIASIPIRTGGGALVPFSQVASIELDEGYSFIRRESLQRY 815
            G KRF++ +R  +  R S   + ++ I    G  VP  +VA I    G   I R++  R 
Sbjct: 778  GEKRFDLVIRFDEAHRKSIDDLRTLYIDLPDGTQVPIKEVADISYVPGPMQISRDNTYRR 837

Query: 816  SVLQMDVKGRDVDSFVKEADTQLKAQVELPTGYWIEWGGSFENQQRAMARLGVIVPLTIG 875
            + + ++V+GRDV+S V +   +L ++++LP GY+I +GG FEN QRA  RL ++VP+ + 
Sbjct: 838  TYVGVNVRGRDVESVVNDIQEKLDSELDLPAGYYISYGGEFENLQRAKQRLQIVVPIALF 897

Query: 876  LIFILLYTAFNSVRHATLIIANVPFAIIGGIVGLFVSGQYLSVPSAIGFIAVFGVAMLNG 935
            LIF+LLY A  S   + +I   +P A IGG+  L++     S+ + +GFI +FGVA+LNG
Sbjct: 898  LIFVLLYFALKSFSQSIMIYIAIPLAAIGGVFALWLRDMPFSISAGVGFIVLFGVAVLNG 957

Query: 936  IVMVTFLNDLRRQGL-PIREAVQQGAALRLRPVLMTASVAILGLIPMLLSTGVGAETQRP 994
            +V++   N L+ +G+  IR+ +  G   R+RP+++TA+  I G +PM  S   GAE QRP
Sbjct: 958  LVLINRFNSLKEEGVTSIRDRILTGTKERIRPIMLTATTDIFGFLPMAFSASAGAEVQRP 1017

Query: 995  LATVVVGGLFTSTALTLLILPLMYEWAEQRAERRK 1029
            LATVV+GG+ T+T LTL++LP++Y + E R+++RK
Sbjct: 1018 LATVVIGGMLTATLLTLVVLPVLYTFVEGRSDKRK 1052