Pairwise Alignments

Query, 889 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 652 a.a., putative transposase from Pseudomonas putida KT2440

 Score = 45.4 bits (106), Expect = 1e-08
 Identities = 95/481 (19%), Positives = 173/481 (35%), Gaps = 93/481 (19%)

Query: 354 EAVEKLKTLENCSSESSASDLGAKWRTVMRWKAKYREFEARYGNGFLGLITQDHLKGNRT 413
           + ++KL+ +     ++ A  +     T+ RW AKY       G   + LI Q H K  R 
Sbjct: 112 DMIKKLRDIAKKIGDACAPSVS----TIRRWAAKY------IGQNVVKLIPQ-HAKKGRA 160

Query: 414 PRTETKEQELMAKAFK--FLKAPLPRDVSAGYAYYIALCE-EEHIEPRSQDKF------- 463
              + + + ++       +L+  +P       A  + + E E+ I+ R++ +        
Sbjct: 161 AAIQGELEVILEGVINKTYLQDTIP-------AVSVVVSEFEDQIKERNKSRLPSDQLKI 213

Query: 464 ------YRKWKRQDIHQVTEDREGKRAAQVQMPPRMSGGAHVNQGPVEGDSPFARVHIDH 517
                  R   + D + V ++R GK AA  +          V  G +       R  IDH
Sbjct: 214 PSGMTVRRYIAKLDPYLVDKERLGKHAADKKH--------RVAAGVLRVHEILERWEIDH 265

Query: 518 RQSDMFCRRLNGVDLIGKPWFSIAIDAFTRLVLGLWTSMLEPSHASVMMVLR-------D 570
              D+          IG+P+ +I +D F+R+V+G    +  P+  +V+ V+        +
Sbjct: 266 TLLDVQLVDETSGLCIGRPYLTIVLDRFSRMVMGYLLHLSAPNTETVLRVIERSIRPKAE 325

Query: 571 IVRRHGK---------LPMMVITDGGREFQAKLIQQMLALYHCEHALRPNSEPRYGNPVE 621
           +++R  K         LP  ++ D   EF A  +         E     +  P+    VE
Sbjct: 326 LLKRFPKVRNEWWARGLPARIVPDNAAEFHAGDLIMGFNELGIEIMYPASRAPQRKGAVE 385

Query: 622 R----MNLTIDHHLTTVLLGSNEVLKKPRMSSSTHDPRDLAYLTVPGLAEKAEDLMFRLY 677
           R     NL + H+L      + +           +D    A  T+P L       +   Y
Sbjct: 386 RFFSTQNLGLIHNLPGTTFSNIQ-------QRGDYDSEKNACFTLPQLEAVVVKWIVDGY 438

Query: 678 PDMPH-GVLGSTPNKILCSASITQGTSWGRPTPFDD---VFIRNTLARAHKHG------- 726
              PH G+   TP ++  ++      S   P   D    +  +    + H +G       
Sbjct: 439 HQTPHRGLDNRTPAQVWGTSEANHVIS--LPVDLDSLECILAKRASVKVHHYGIEVAKVG 496

Query: 727 --------GLMRQRDGIRLNGHNYYASEIA-AWTHKKMEDVPFYDPEDPTYISARINRKW 777
                     MR  DG ++N    Y  E    W H +  ++ F  P     ++ +    W
Sbjct: 497 YHSTELAELRMRLADGEKVNVR--YRDEAGHVWVHDRFRNLFFKVPAKDERMAGKSREVW 554

Query: 778 E 778
           +
Sbjct: 555 K 555