Pairwise Alignments

Query, 403 a.a., D-amino acid dehydrogenase (EC 1.4.99.6) from Variovorax sp. SCN45

Subject, 397 a.a., putative D-amino acid dehydrogenase 2 small subunit from Pseudomonas putida KT2440

 Score =  251 bits (641), Expect = 3e-71
 Identities = 161/402 (40%), Positives = 220/402 (54%), Gaps = 13/402 (3%)

Query: 3   VCVLGAGIVGLATAWQLERQGHQVTVID-RATPGAGASGGNGAQLSYSYVQPLADPSIWK 61
           V V+G G+VGLATA+ L R+G  V +I+ R +  +  S  NG QLSY YV PLAD  +  
Sbjct: 5   VTVIGGGVVGLATAYALVREGWSVDLIEARDSLASATSFANGGQLSYRYVAPLADAGVPW 64

Query: 62  QLPKLLLSPTSPLKLRPQLDPLQWRWGMAFLAACNARTSRDTTARLLALAAESRAGFESM 121
           Q    LL   SPL+LR ++DP QWRW +AF  AC    +R    +LL LA  S+A     
Sbjct: 65  QALGWLLRGESPLRLRLRMDPAQWRWLLAFTLACRRSVNRRNAGQLLELALCSQAVLAQW 124

Query: 122 QADIS-PDCDFSATGKLVLYASAASLEGARAQVELQRTMGSEQRLVTPDECIAIEPALAG 180
           + D +  D  +   GKLV + S    E A AQ   Q T  + Q+++   E   +EPAL G
Sbjct: 125 REDHNLGDFGWRRNGKLVAFRS----ERAFAQGREQLTDPASQQVLAAAELRGLEPALDG 180

Query: 181 YRGQMAGAVYTPSECAADCLKVCAELMRALGARG-VRFMLGTDVHGFARDDKRIAAVRTS 239
                 G V+T  E   DC   C  L   L A G  RF+LG  V    +   ++ A++  
Sbjct: 181 --APFVGGVFTAGEEVGDCHVFCLRLEALLRASGQCRFLLGRPVTQLVQRQGQVVALQLG 238

Query: 240 GGDVEAEAFVMALGTASHKLGRALGAYLPVYPLKGYSITVDVDPAPGAAPHVNVTDSARK 299
              ++ E  V+  G     L    G  +PVYPLKGYS+T  +  A    P V++TD  RK
Sbjct: 239 DQQLDVEQLVLCAGHRGPGLALP-GVQIPVYPLKGYSLTAPIS-AGHLPPEVSLTDYERK 296

Query: 300 VVFARIGSRLRVAGMAELVGHDASIPAARIETLEAATRALFPHASRFEELHLWTGMRPAT 359
           +V+AR+G +LRVA M ++VG D S+   R++++        P A+ + +   W GMRPAT
Sbjct: 297 IVYARLGQQLRVAAMVDIVGFDESVDMRRLQSMRRLALETLPRAADYGQAVEWAGMRPAT 356

Query: 360 PKGLPIIGQLESAPPNMLFNTGHGALGFTLAFGSAQRIARAL 401
           P G+PIIG   +   N+  N GHGALGFTLA GSAQR+AR +
Sbjct: 357 PTGVPIIG--GTVYRNLWLNLGHGALGFTLACGSAQRLARMM 396