Pairwise Alignments

Query, 938 a.a., DNA polymerase I (EC 2.7.7.7) from Variovorax sp. SCN45

Subject, 915 a.a., DNA polymerase I, 5 from Pseudomonas putida KT2440

 Score =  886 bits (2289), Expect = 0.0
 Identities = 496/948 (52%), Positives = 635/948 (66%), Gaps = 54/948 (5%)

Query: 7   LLLVDGSSYLYRAFHAMPDLRAVPGDPKSPATGAIRGMINMMTALRREVRADYAACIFDA 66
           L+LVDGSSYLYRAFHA+P L    G P    TGA++G++NM+ +LR++      A +FDA
Sbjct: 6   LVLVDGSSYLYRAFHALPPLTTSKGMP----TGAVKGVLNMLKSLRKQYPDSLFAVVFDA 61

Query: 67  PGKTFRDDWYPEYKANRSPMPDDLRSQIDPIHEVVKLLGWPVLSVPDVEADDVIGTLAKI 126
            G TFRD  + EYKANR  MPDDLR QI+P+H  VK LG+P+L V  VEADDVIGTLA+ 
Sbjct: 62  KGGTFRDAMFAEYKANRPSMPDDLRVQIEPLHASVKALGYPLLCVEGVEADDVIGTLARS 121

Query: 127 AAAQGVEVIVSSGDKDLSQLVDEHITIIDTMNGKKRDVAGVTAEFGVPPHLMVDYQTLVG 186
           +AA G  VI+S+GDKD++QLVD HIT+++TM G   DVAGV  +FGV P  ++D+  L+G
Sbjct: 122 SAALGRPVIISTGDKDMAQLVDGHITLVNTMTGSVLDVAGVHEKFGVGPEHIIDFLALMG 181

Query: 187 DSVDNVPGVPKVGPKTAAKWLLE--------YGSLD---ALVERAAEVKGAAGENLRGAL 235
           D VDN+PGVP VG KTA   L          Y +LD   AL  R A+   A  E  R   
Sbjct: 182 DKVDNIPGVPGVGEKTAVGLLTGIGGGLSDLYANLDKVPALAIRGAKTLPAKLEEHR--- 238

Query: 236 DKLPLSKRLVTIRTDCELDGHVTGLPSLEGLPVGAPRTAELKPFYEKFGFKSLVKTLEAQ 295
           D   LS  L TI+ D  LD  V      E L  G P    L   Y +  FKS V  L+  
Sbjct: 239 DAAFLSYELATIKVDVPLDVEV------EALVCGEPDREALLALYTEMEFKSWVAELQ-- 290

Query: 296 EVPPELIEENIKKKAASKADKDQGGLFDEPADLSALEAAAPASNLKYDTVMSWEQFDTWL 355
                        + A+KA  D       PA   A++  A     KY+T++   +FD WL
Sbjct: 291 -------------RDAAKAGDDVA-----PAVEPAVKVEA-----KYETILDQARFDAWL 327

Query: 356 ARLEASELAAIDTETTSLDEMVAQIVGVSFSVTPGEAAYIPLAHNYPDAPEQLPIDEVLA 415
            +L  + L A DTETT LD   AQ+VG+SF+V P EAAY+PLAH+Y  AP QL  + VL 
Sbjct: 328 EKLRQAPLFAFDTETTGLDAQQAQLVGLSFAVEPHEAAYVPLAHDYEGAPVQLDREAVLL 387

Query: 416 KLKPWLENGDKKKLGQHIKYDRHVFANHG--IEVQGYAHDTMLQSYVLE-VHKPHGLSSL 472
            LKP LE+  K K+GQ+ KYD ++ AN    IE++G A+DTML+SYVL      H + SL
Sbjct: 388 ALKPLLEDPAKAKVGQNAKYDINILANGSPAIEMRGVAYDTMLESYVLNSTATRHDMDSL 447

Query: 473 AERHLGRSGISYEDLCGKGAHQIPFSQVDIAKAAEYSCEDSDQTLDVHNTLWPQLERDEK 532
           A+++L  + I++ED+ GKGA Q+ F+Q+++ KA  Y+ ED+D TL +H+ L  +L +   
Sbjct: 448 AQKYLDHTTIAFEDIAGKGAKQLTFNQINLDKAGPYAAEDADITLRLHHALQARLAQTPS 507

Query: 533 LR-FIYQLEMDSSEALYRIERNGVLIDAPTLASQSHELGTRIMALEQEAYDIAGQPFNLG 591
           ++  +  +EM     L RIER G L+DA  L  QS ELG ++  LE  AY++AG+ FNLG
Sbjct: 508 VQPVLMDIEMPLVPVLARIERQGALVDAELLKVQSGELGVKMAELELRAYELAGETFNLG 567

Query: 592 SPKQIGEIFFTKLGLPVVKKTPSGAPSTDEEVLEKLA-EDYPLPAKILEHRGLSKLKGTY 650
           SPKQ+G I + KLG+PV+ KT  G PST E VL++LA + YPLP  ++++R LSKLK TY
Sbjct: 568 SPKQLGTILYDKLGMPVLSKTAKGQPSTAEAVLDELALQGYPLPEVLMQYRSLSKLKSTY 627

Query: 651 TDKLGQLANPRTGRVHTHYAQAVAVTGRLSSNDPNLQNIPIRTPEGRRVREAFVAPAGSV 710
           TDKL    NPRTGR+HT Y QAVA TGRLSS+DPNLQNIPIRT EGRR+R+AF+A  G  
Sbjct: 628 TDKLPGQINPRTGRIHTSYQQAVAATGRLSSSDPNLQNIPIRTAEGRRIRQAFIASPGYK 687

Query: 711 IASADYSQIELRIMAHISGDESLLRAFTDGIDVHRATAAEVFGSTPDEVSSEQRRYAKVI 770
           + +ADYSQIELRIMAH++ DE LL AF + +DVHRATAAEVFG   ++V+++QRR AK I
Sbjct: 688 LLAADYSQIELRIMAHLAKDEGLLHAFRNDLDVHRATAAEVFGVALEDVTTDQRRSAKAI 747

Query: 771 NFGLIYGMSSFGLAKNLGIETKAAASYIERYFARYPGVKAYMDETKALAKEQGYVETVFG 830
           NFGLIYGMS+FGLAK +G++ K +  YI+RYFARYPGV AYM+ T+A A EQG+VET+FG
Sbjct: 748 NFGLIYGMSAFGLAKQIGVDRKQSQDYIDRYFARYPGVLAYMERTRAQAAEQGFVETLFG 807

Query: 831 RRLYLPEINSPNGPRRGGAERAAINAPMQGTAADLIKLSMVKVQNVLDEEKRGTKMIMQV 890
           RRLYLP+IN+ N   R GAER AINAPMQGTAAD+IK +MVKV N L E     ++I+QV
Sbjct: 808 RRLYLPDINAKNPALRKGAERTAINAPMQGTAADIIKRAMVKVDNWLSESGLDARVILQV 867

Query: 891 HDELVFEVPEGEVEWVRTEIPRIMAGVAALKVPLLAEIGVGPNWDKAH 938
           HDELV EV E  V+ V+ EI + M+  A L VPLL E GVG NWD+AH
Sbjct: 868 HDELVLEVREDLVQQVKDEIRQHMSQAAQLDVPLLVEAGVGANWDEAH 915